RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 LHFPL1Q86WI0 220 aa16.09■□□□□ 0.17
CCDC12-207ENST00000494655 FAM223AQ8IWN6 122 aa16.09■□□□□ 0.17
CCDC12-207ENST00000494655 ALX4Q9H161 411 aaPredicted RBP16.09■□□□□ 0.17
CCDC12-207ENST00000494655 SEC14L6B5MCN3 397 aa16.08■□□□□ 0.16
CCDC12-207ENST00000494655 UPK2O00526 184 aa16.08■□□□□ 0.16
CCDC12-207ENST00000494655 GSTZ1O43708 216 aaPredicted RBP16.08■□□□□ 0.16
CCDC12-207ENST00000494655 SNAPC5O75971 98 aa16.08■□□□□ 0.16
CCDC12-207ENST00000494655 KRASP01116 189 aa16.08■□□□□ 0.16
CCDC12-207ENST00000494655 HSPB1P04792 205 aaKnown RBP16.08■□□□□ 0.16
CCDC12-207ENST00000494655 SERPINE2P07093 398 aa16.08■□□□□ 0.16
CCDC12-207ENST00000494655 ZNF735P0CB33 412 aa16.08■□□□□ 0.16
CCDC12-207ENST00000494655 THOC7Q6I9Y2 204 aaKnown RBP16.08■□□□□ 0.16
CCDC12-207ENST00000494655 TTC9CQ8N5M4 171 aa16.08■□□□□ 0.16
CCDC12-207ENST00000494655 TERB2Q8NHR7 220 aa16.08■□□□□ 0.16
CCDC12-207ENST00000494655 TSC22D3Q99576 134 aa16.08■□□□□ 0.16
CCDC12-207ENST00000494655 COPZ2Q9P299 210 aa16.08■□□□□ 0.16
CCDC12-207ENST00000494655 C14orf166Q9Y224 244 aaKnown RBP16.08■□□□□ 0.16
CCDC12-207ENST00000494655 TNCP24821 2201 aa16.08■□□□□ 0.16
CCDC12-207ENST00000494655 IGHV4OR15-8A0A075B7B6 117 aa16.07■□□□□ 0.16
CCDC12-207ENST00000494655 A0A087WW49 117 aa16.07■□□□□ 0.16
CCDC12-207ENST00000494655 RPA2P15927 270 aa16.07■□□□□ 0.16
CCDC12-207ENST00000494655 PIGPP57054 158 aa16.07■□□□□ 0.16
CCDC12-207ENST00000494655 RND3P61587 244 aa16.07■□□□□ 0.16
CCDC12-207ENST00000494655 OR4D10Q8NGI6 311 aa16.07■□□□□ 0.16
CCDC12-207ENST00000494655 PRRT1Q99946 306 aa16.07■□□□□ 0.16
CCDC12-207ENST00000494655 RANGRFQ9HD47 186 aaPredicted RBP16.07■□□□□ 0.16
CCDC12-207ENST00000494655 HMX3A6NHT5 357 aa16.06■□□□□ 0.16
CCDC12-207ENST00000494655 NPIPB5A8MRT5 1133 aa16.06■□□□□ 0.16
CCDC12-207ENST00000494655 TEX22C9J3V5 150 aa16.06■□□□□ 0.16
CCDC12-207ENST00000494655 OVOL1O14753 267 aa16.06■□□□□ 0.16
CCDC12-207ENST00000494655 CYB5BO43169 146 aa16.06■□□□□ 0.16
CCDC12-207ENST00000494655 WIPF1O43516 503 aa16.06■□□□□ 0.16
CCDC12-207ENST00000494655 ATG12O94817 140 aa16.06■□□□□ 0.16
CCDC12-207ENST00000494655 ZP3P21754 424 aa16.06■□□□□ 0.16
CCDC12-207ENST00000494655 FAUP35544 74 aaKnown RBP16.06■□□□□ 0.16
CCDC12-207ENST00000494655 G6PCP35575 357 aa16.06■□□□□ 0.16
CCDC12-207ENST00000494655 RHOGP84095 191 aa16.06■□□□□ 0.16
CCDC12-207ENST00000494655 FAM209BQ5JX69 171 aa16.06■□□□□ 0.16
CCDC12-207ENST00000494655 NECAP1Q8NC96 275 aa16.06■□□□□ 0.16
CCDC12-207ENST00000494655 QTRT1Q9BXR0 403 aaKnown RBP16.06■□□□□ 0.16
CCDC12-207ENST00000494655 H0Y980 276 aa16.05■□□□□ 0.16
CCDC12-207ENST00000494655 DEFA4P12838 97 aa16.05■□□□□ 0.16
CCDC12-207ENST00000494655 PI3P19957 117 aa16.05■□□□□ 0.16
CCDC12-207ENST00000494655 HOXD3P31249 432 aaPredicted RBP16.05■□□□□ 0.16
CCDC12-207ENST00000494655 AP3S2P59780 193 aa16.05■□□□□ 0.16
CCDC12-207ENST00000494655 ATP5G2Q06055 141 aa16.05■□□□□ 0.16
CCDC12-207ENST00000494655 SURF2Q15527 256 aaPredicted RBP16.05■□□□□ 0.16
CCDC12-207ENST00000494655 PYDC2Q56P42 97 aa16.05■□□□□ 0.16
CCDC12-207ENST00000494655 SPANXN2Q5MJ10 180 aa16.05■□□□□ 0.16
CCDC12-207ENST00000494655 FAAP20Q6NZ36 180 aa16.05■□□□□ 0.16
CCDC12-207ENST00000494655 HSD17B13Q7Z5P4 300 aaPredicted RBP16.05■□□□□ 0.16
CCDC12-207ENST00000494655 OR4C16Q8NGL9 310 aa16.05■□□□□ 0.16
CCDC12-207ENST00000494655 OR13C8Q8NGS7 320 aa16.05■□□□□ 0.16
CCDC12-207ENST00000494655 SRSF8Q9BRL6 282 aaKnown RBP16.05■□□□□ 0.16
CCDC12-207ENST00000494655 FKBP11Q9NYL4 201 aa16.05■□□□□ 0.16
CCDC12-207ENST00000494655 NDUFA13Q9P0J0 144 aa16.05■□□□□ 0.16
CCDC12-207ENST00000494655 PRNDQ9UKY0 176 aa16.05■□□□□ 0.16
CCDC12-207ENST00000494655 ANKRD20A5PA0PJZ0 165 aa16.04■□□□□ 0.16
CCDC12-207ENST00000494655 ANKRD34BA5PLL1 514 aa16.04■□□□□ 0.16
CCDC12-207ENST00000494655 PRB2P02812 416 aaPredicted RBP16.04■□□□□ 0.16
CCDC12-207ENST00000494655 IL6RP08887 468 aaPredicted RBP16.04■□□□□ 0.16
CCDC12-207ENST00000494655 HIST1H1BP16401 226 aaKnown RBP16.04■□□□□ 0.16
CCDC12-207ENST00000494655 PSMB6P28072 239 aa16.04■□□□□ 0.16
CCDC12-207ENST00000494655 INSL3P51460 131 aa16.04■□□□□ 0.16
CCDC12-207ENST00000494655 SLURP1P55000 103 aa16.04■□□□□ 0.16
CCDC12-207ENST00000494655 OR2B8PP59922 312 aa16.04■□□□□ 0.16
CCDC12-207ENST00000494655 DEFA5Q01523 94 aa16.04■□□□□ 0.16
CCDC12-207ENST00000494655 EXOSC2Q13868 293 aaKnown RBP16.04■□□□□ 0.16
CCDC12-207ENST00000494655 ZNF585BQ52M93 769 aa16.04■□□□□ 0.16
CCDC12-207ENST00000494655 H2BFWTQ7Z2G1 175 aa16.04■□□□□ 0.16
CCDC12-207ENST00000494655 CADM3Q8N126 398 aa16.04■□□□□ 0.16
CCDC12-207ENST00000494655 MARCH1Q8TCQ1 289 aa16.04■□□□□ 0.16
CCDC12-207ENST00000494655 MCUBQ9NWR8 336 aa16.04■□□□□ 0.16
CCDC12-207ENST00000494655 AURKAIP1Q9NWT8 199 aaPredicted RBP16.04■□□□□ 0.16
CCDC12-207ENST00000494655 SCP2D1Q9UJQ7 156 aa16.04■□□□□ 0.16
CCDC12-207ENST00000494655 B3GALNT1O75752 331 aa16.03■□□□□ 0.16
CCDC12-207ENST00000494655 PRH1P02810 166 aa16.03■□□□□ 0.16
CCDC12-207ENST00000494655 CTSDP07339 412 aaPredicted RBP16.03■□□□□ 0.16
CCDC12-207ENST00000494655 PTBP1P26599 531 aaKnown RBP eCLIP16.03■□□□□ 0.163e-6■□□□□ 11.1
CCDC12-207ENST00000494655 EGFEM1PQ0D2K5 195 aa16.03■□□□□ 0.16
CCDC12-207ENST00000494655 OR1L8Q8NGR8 309 aa16.03■□□□□ 0.16
CCDC12-207ENST00000494655 MRAPQ8TCY5 172 aa16.03■□□□□ 0.16
CCDC12-207ENST00000494655 DCUN1D4Q92564 292 aa16.03■□□□□ 0.16
CCDC12-207ENST00000494655 THAP7Q9BT49 309 aaPredicted RBP16.03■□□□□ 0.16
CCDC12-207ENST00000494655 AKIP1Q9NQ31 210 aa16.03■□□□□ 0.16
CCDC12-207ENST00000494655 PEF1Q9UBV8 284 aaKnown RBP16.03■□□□□ 0.16
CCDC12-207ENST00000494655 TRAV3A0A0B4J244 114 aa16.02■□□□□ 0.16
CCDC12-207ENST00000494655 C3orf85A0A1B0GTC6 90 aa16.02■□□□□ 0.16
CCDC12-207ENST00000494655 RBMXL2O75526 392 aaKnown RBP16.02■□□□□ 0.16
CCDC12-207ENST00000494655 TRAPPC2P0DI81 140 aa16.02■□□□□ 0.16
CCDC12-207ENST00000494655 TRAPPC2BP0DI82 140 aa16.02■□□□□ 0.16
CCDC12-207ENST00000494655 MYOD1P15172 320 aa16.02■□□□□ 0.16
CCDC12-207ENST00000494655 AREGP15514 252 aa16.02■□□□□ 0.16
CCDC12-207ENST00000494655 AKR1C2P52895 323 aa16.02■□□□□ 0.16
CCDC12-207ENST00000494655 TRIM16LQ309B1 348 aa16.02■□□□□ 0.16
CCDC12-207ENST00000494655 C15orf32Q32M92 178 aa16.02■□□□□ 0.16
CCDC12-207ENST00000494655 ZNF343Q6P1L6 599 aa16.02■□□□□ 0.16
CCDC12-207ENST00000494655 Q8N402 240 aa16.02■□□□□ 0.16
CCDC12-207ENST00000494655 OR4A16Q8NH70 328 aa16.02■□□□□ 0.16
CCDC12-207ENST00000494655 RNASE11Q8TAA1 199 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms