RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 DBX1A6NMT0 343 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 FAM90A9PA6NNJ1 464 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 LINC00473A8K010 186 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 H0YJW9 148 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 LY6LH3BQJ8 138 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 H7C2Y5 167 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 GOSR2O14653 212 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 PFDN1O60925 122 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 GIPP09681 153 aaPredicted RBP9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 PET100P0DJ07 73 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 CT45A6P0DMU7 189 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 CT45A5P0DMU8 189 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 CT45A7P0DMV0 189 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 SLC25A6P12236 298 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 NQO2P16083 231 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 CD1BP29016 333 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 BRS3P32247 399 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 DYNLT3P51808 116 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 ANKRD55Q3KP44 614 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 SP6Q3SY56 376 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 C8orf86Q6ZUL3 223 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 MOB3BQ86TA1 216 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 ZNF383Q8NA42 475 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 VSTM2AQ8TAG5 236 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 LSM10Q969L4 123 aaKnown RBP9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 PRR25Q96S07 402 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 RNF5Q99942 180 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 LINC00527Q9UJ94 153 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 U3KQK5 164 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 PLECQ15149 4684 aaKnown RBP9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 C5orf51A6NDU8 294 aa9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 MARCH11A6NNE9 402 aa9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 SPDEFO95238 335 aa9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 CRYZL1O95825 349 aa9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 LPAR6P43657 344 aa9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 RAP2BP61225 183 aa9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 RPL30P62888 115 aaKnown RBP9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 FCN2Q15485 313 aa9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 OR2B11Q5JQS5 317 aa9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 SLC35G3Q8N808 338 aa9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 DRAXINQ8NBI3 349 aaPredicted RBP9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 FLYWCH2Q96CP2 140 aaKnown RBP9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 HARBI1Q96MB7 349 aa9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 NOL4LQ96MY1 436 aaPredicted RBP9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 TSNAXQ99598 290 aaKnown RBP9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 SLC25A33Q9BSK2 321 aa9.24□□□□□ -0.93
CSNK1E-212ENST00000494610 A0A1B0GU03 582 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 A0A1W2PPI3 338 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 FAM25EA8MYX2 175 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 SHOXO15266 292 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 PROP1O75360 226 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 CCNKO75909 580 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 S1PR2O95136 353 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 FGF2P09038 288 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 LGALS7P47929 136 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 REG1BP48304 166 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 FGL1Q08830 312 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 POU2AF1Q16633 256 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 VMA21Q3ZAQ7 101 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 TMEM177Q53S58 311 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 H2BFWTQ7Z2G1 175 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 SELENOHQ8IZQ5 122 aaKnown RBP9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 DMBX1Q8NFW5 382 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 OR4X2Q8NGF9 303 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 OR4A5Q8NH83 315 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 PPP1R14BQ96C90 147 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 NMES1Q9C002 83 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 ZNF436Q9C0F3 470 aaPredicted RBP9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 COA4Q9NYJ1 87 aa9.23□□□□□ -0.93
CSNK1E-212ENST00000494610 RAMP3O60896 148 aa9.22□□□□□ -0.93
CSNK1E-212ENST00000494610 HOXB5P09067 269 aa9.22□□□□□ -0.93
CSNK1E-212ENST00000494610 FAM106CPP0CH98 169 aa9.22□□□□□ -0.93
CSNK1E-212ENST00000494610 SMCO1Q147U7 214 aa9.22□□□□□ -0.93
CSNK1E-212ENST00000494610 IAH1Q2TAA2 248 aaPredicted RBP9.22□□□□□ -0.93
CSNK1E-212ENST00000494610 ZNF585BQ52M93 769 aa9.22□□□□□ -0.93
CSNK1E-212ENST00000494610 GGNBP1Q5YKI7 109 aa9.22□□□□□ -0.93
CSNK1E-212ENST00000494610 LCNL1Q6ZST4 164 aa9.22□□□□□ -0.93
CSNK1E-212ENST00000494610 OR11H7Q8NGC8 314 aa9.22□□□□□ -0.93
CSNK1E-212ENST00000494610 OR2T10Q8NGZ9 312 aa9.22□□□□□ -0.93
CSNK1E-212ENST00000494610 RBMXL1Q96E39 390 aaKnown RBP9.22□□□□□ -0.93
CSNK1E-212ENST00000494610 C2orf50Q96LR7 162 aa9.22□□□□□ -0.93
CSNK1E-212ENST00000494610 GPHA2Q96T91 129 aa9.22□□□□□ -0.93
CSNK1E-212ENST00000494610 LSM4Q9Y4Z0 139 aaKnown RBP9.22□□□□□ -0.93
CSNK1E-212ENST00000494610 C13orf42A0A1B0GVH6 325 aa9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 PSMB11A5LHX3 300 aa9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 LINC01548A6NM66 108 aa9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 FAM90A26D6RGX4 464 aa9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 SNAPC5O75971 98 aa9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 OR2A4O95047 310 aa9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 LY86O95711 162 aa9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 MOSP00540 346 aa9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 RPS16P62249 146 aaKnown RBP9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 RPL23AP62750 156 aaKnown RBP9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 DEFB136Q30KP8 78 aa9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 NMSQ5H8A3 153 aa9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 LYZL2Q7Z4W2 148 aa9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 THNSL2Q86YJ6 484 aa9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 TCTE3Q8IZS6 198 aa9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 OR8H1Q8NGG4 311 aa9.21□□□□□ -0.94
CSNK1E-212ENST00000494610 LHFPL5Q8TAF8 219 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms