RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 ARR3P36575 388 aa8.78□□□□□ -1
PDLIM1-205ENST00000493949 CARD18P57730 90 aa8.78□□□□□ -1
PDLIM1-205ENST00000493949 UBE2NP61088 152 aaKnown RBP8.78□□□□□ -1
PDLIM1-205ENST00000493949 SLC38A11Q08AI6 406 aa8.78□□□□□ -1
PDLIM1-205ENST00000493949 VWC2Q2TAL6 325 aa8.78□□□□□ -1
PDLIM1-205ENST00000493949 MRPL21Q7Z2W9 205 aaKnown RBP8.78□□□□□ -1
PDLIM1-205ENST00000493949 GGNQ86UU5 652 aa8.78□□□□□ -1
PDLIM1-205ENST00000493949 CALHM1Q8IU99 346 aa8.78□□□□□ -1
PDLIM1-205ENST00000493949 OR2T10Q8NGZ9 312 aa8.78□□□□□ -1
PDLIM1-205ENST00000493949 NEIL1Q96FI4 390 aaPredicted RBP8.78□□□□□ -1
PDLIM1-205ENST00000493949 NEU1Q99519 415 aa8.78□□□□□ -1
PDLIM1-205ENST00000493949 CCL28Q9NRJ3 127 aa8.78□□□□□ -1
PDLIM1-205ENST00000493949 OR6C3Q9NZP0 311 aa8.78□□□□□ -1
PDLIM1-205ENST00000493949 IGKV1D-13A0A0B4J2D9 117 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 KIR2DL5BA0A0G2JN68 375 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 KIR2DL5BA0A0G2JPC4 375 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 XKRY2A2RUG3 117 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 FAM90A9PA6NNJ1 464 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 SCTP09683 121 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 IGKV1-13P0DP09 117 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 BCL3P20749 454 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 IDH3GP51553 393 aaPredicted RBP8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 NUTF2P61970 127 aaKnown RBP8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 RPL23P62829 140 aaKnown RBP8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 GNG3P63215 75 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 FOXL1Q12952 345 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 P2RY6Q15077 328 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 ADIRFQ15847 76 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 ZNF726P1Q15940 193 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 CEACAM16Q2WEN9 425 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 COX19Q49B96 90 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 C16orf82Q7Z2V1 217 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 KIR2DL5AQ8N109 375 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 NEK7Q8TDX7 302 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 DYRK2Q92630 601 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 MEGF10Q96KG7 1140 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 PIMREGQ9BSJ6 248 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 SRXN1Q9BYN0 137 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 KCNIP1Q9NZI2 227 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 HSPB7Q9UBY9 170 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 CACNG5Q9UF02 275 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 ARL2-SNX15V9GYD0 113 aa8.77□□□□□ -1.01
PDLIM1-205ENST00000493949 A0A1B0GV90 55 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 ANKRD30BLA7E2S9 258 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 E7EQL1 145 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 J3QT63 122 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 B4GALT1P15291 398 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 CNN1P51911 297 aaKnown RBP8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 HILS1P60008 231 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 ERVFC1-1P60608 527 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 PPP1CBP62140 327 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 PAFAH1B2P68402 229 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 COL10A1Q03692 680 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 CATR1Q13166 79 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 C1orf194Q5T5A4 169 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 LCN15Q6UWW0 184 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 ZNF66Q6ZN08 573 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 SSX8Q7RTT4 187 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 NUFIP2Q7Z417 695 aaKnown RBP8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 MUC15Q8N387 334 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 ZNF709Q8N972 641 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 OR56B2PQ8NGI1 322 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 CYYR1Q96J86 154 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 PRRG4Q9BZD6 226 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 RBKSQ9H477 322 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 MBNL3Q9NUK0 354 aaKnown RBP8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 GAB2Q9UQC2 676 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 POLDIP2Q9Y2S7 368 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 LY96Q9Y6Y9 160 aa8.76□□□□□ -1.01
PDLIM1-205ENST00000493949 TRBV9A0A0B4J1U6 114 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 IGKV1-6A0A0C4DH72 117 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 TMEM210A6NLX4 147 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 M0R143 59 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 MLNRO43193 412 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 CXCL13O43927 109 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 ESDP10768 282 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 PSG2P11465 335 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 OR10J1P30954 320 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 RPP30P78346 268 aaKnown RBP8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 TNFRSF9Q07011 255 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 TMEM267Q0VDI3 215 aaPredicted RBP8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 GAGE1Q13065 139 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 SCGB2A2Q13296 93 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 GFI1BQ5VTD9 330 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 FIP1L1Q6UN15 594 aaKnown RBP8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 FAM58AQ8N1B3 248 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 GBGT1Q8N5D6 347 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 OR10D3Q8NH80 312 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 ZNF418Q8TF45 676 aaPredicted RBP8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 RHOVQ96L33 236 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 OR4C12Q96R67 309 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 RSG1Q9BU20 258 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 PARLQ9H300 379 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 OR51B6Q9H340 312 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 WIPI2Q9Y4P8 454 aa8.75□□□□□ -1.01
PDLIM1-205ENST00000493949 IGHV3-15A0A0B4J1V0 119 aa8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 A0A1B0GWJ7 208 aa8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 TCAPO15273 167 aa8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 GYPAP02724 150 aa8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 GNB2P62879 340 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms