RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ZNF705GA8MUZ8 300 aaPredicted RBP11.4□□□□□ -0.58
VCP-207ENST00000493886 THBDP07204 575 aa11.4□□□□□ -0.58
VCP-207ENST00000493886 FAM87AP0C7U9 286 aa11.4□□□□□ -0.58
VCP-207ENST00000493886 TXN2Q99757 166 aa11.4□□□□□ -0.58
VCP-207ENST00000493886 SLC25A22Q9H936 323 aa11.4□□□□□ -0.58
VCP-207ENST00000493886 CEP295Q9C0D2 2601 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 MAP1LC3B2A6NCE7 125 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 B9A039 149 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 SOD3P08294 240 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 TFPI2P48307 235 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 PRRX1P54821 245 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 C11orf42Q8N5U0 333 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 MAP1LC3BQ9GZQ8 125 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 OR6C3Q9NZP0 311 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 PTPRQQ9UMZ3 2332 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 SMG1Q96Q15 3661 aaKnown RBP11.39□□□□□ -0.59
VCP-207ENST00000493886 F2RL2O00254 374 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 YPEL1O60688 119 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 GPR12P47775 334 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 RPL29P47914 159 aaKnown RBP11.39□□□□□ -0.59
VCP-207ENST00000493886 BSPH1Q075Z2 132 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 WDR25Q64LD2 544 aaPredicted RBP11.39□□□□□ -0.59
VCP-207ENST00000493886 Q8TCH9 128 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 FRZBQ92765 325 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 YPEL2Q96QA6 119 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 CLN8Q9UBY8 286 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 C20orf202A1L168 122 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 XKRY2A2RUG3 117 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 CLDN14O95500 239 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 IGKV1D-33P01593 117 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 IGKV1-33P01594 117 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 MAS1LP35410 378 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 LOXL3P58215 753 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 SLC38A11Q08AI6 406 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 ADIRFQ15847 76 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 STUMQ69YW2 141 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 SLC35E3Q7Z769 313 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 DEFB108BQ8NET1 73 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 RPUSD4Q96CM3 377 aaKnown RBP11.39□□□□□ -0.59
VCP-207ENST00000493886 SDSLQ96GA7 329 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 CALYQ9NYX4 217 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 HSPB7Q9UBY9 170 aa11.39□□□□□ -0.59
VCP-207ENST00000493886 A0A087WWC5 75 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 TRGC1P0CF51 173 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 PF4V1P10720 104 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 RBPJQ06330 500 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 ADIPOQQ15848 244 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 DUX4L9Q6RFH8 374 aaPredicted RBP11.38□□□□□ -0.59
VCP-207ENST00000493886 GATAD1Q8WUU5 269 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 CORO2AQ92828 525 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.38□□□□□ -0.59
VCP-207ENST00000493886 LAMP3Q9UQV4 416 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 LRRC30A6NM36 301 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 CCL25O15444 150 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 PROP1O75360 226 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 RBMXL2O75526 392 aaKnown RBP11.38□□□□□ -0.59
VCP-207ENST00000493886 PPBPP02775 128 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 OR4A8P0C604 315 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 CGB3P0DN86 165 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 CGB7P0DN87 165 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 HBG1P69891 147 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 HBG2P69892 147 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 LHX4Q969G2 390 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 ROS1P08922 2347 aa11.38□□□□□ -0.59
VCP-207ENST00000493886 RAB29O14966 203 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 FGF7P21781 194 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 DUTP33316 252 aaKnown RBP11.37□□□□□ -0.59
VCP-207ENST00000493886 H2BFWTQ7Z2G1 175 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 TGIF2LYQ8IUE0 185 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 C1orf87Q8N0U7 546 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 LYG1Q8N1E2 194 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 GAFA1Q96PS6 74 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 ALKBH7Q9BT30 221 aaPredicted RBP11.37□□□□□ -0.59
VCP-207ENST00000493886 WDR61Q9GZS3 305 aaKnown RBP11.37□□□□□ -0.59
VCP-207ENST00000493886 DYSFO75923 2080 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 PPP1R2P9O14990 202 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 IGHV3-7P01780 117 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 CCL8P80075 99 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 ATP6V1FQ16864 119 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 C17orf58Q2M2W7 97 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 SSX8Q7RTT4 187 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 ABHD5Q8WTS1 349 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 RND1Q92730 232 aa11.37□□□□□ -0.59
VCP-207ENST00000493886 CISD1Q9NZ45 108 aaKnown RBP11.37□□□□□ -0.59
VCP-207ENST00000493886 NKX6-3A6NJ46 265 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 GFRA3O60609 400 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 GYPAP02724 150 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 ZNF134P52741 427 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 TMPRSS3P57727 454 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 LRRC75BQ2VPJ9 315 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 RPP25LQ8N5L8 163 aaKnown RBP11.36□□□□□ -0.59
VCP-207ENST00000493886 STXBP6Q8NFX7 210 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 CCL13Q99616 98 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 SMIM7Q9BQ49 75 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 CHODLQ9H9P2 273 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 SLC39A9Q9NUM3 307 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 HCFC1P51610 2035 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 DSCAML1Q8TD84 2053 aa11.36□□□□□ -0.59
VCP-207ENST00000493886 RAI1Q7Z5J4 1906 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms