RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 UPK2O00526 184 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 HMGB3O15347 200 aaKnown RBP7.92□□□□□ -1.14
NPHP3-209ENST00000493732 HIST1H2BKO60814 126 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 HIST1H2BJP06899 126 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 SELLP14151 372 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 NDUFB7P17568 137 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 HIST1H2BOP23527 126 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 CCKARP32238 428 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 HIST1H2BBP33778 126 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 HIST1H2BDP58876 126 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 B2MP61769 119 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 RPS16P62249 146 aaKnown RBP7.92□□□□□ -1.14
NPHP3-209ENST00000493732 HIST1H2BCP62807 126 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 RPL31P62899 125 aaKnown RBP7.92□□□□□ -1.14
NPHP3-209ENST00000493732 SSX2Q16385 188 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 HIST2H2BEQ16778 126 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.92□□□□□ -1.14
NPHP3-209ENST00000493732 FAM201AQ5SY85 155 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 ZNF833PQ6ZTB9 187 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 FAM216BQ8N7L0 139 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 OR4A5Q8NH83 315 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 VSTM2AQ8TAG5 236 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 HIST1H2BHQ93079 126 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 ZNF714Q96N38 554 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 IMMP2LQ96T52 175 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 MGST2Q99735 147 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 HIST1H2BNQ99877 126 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 HIST1H2BMQ99879 126 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 SAP30LQ9HAJ7 183 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 TRAV3A0A0B4J244 114 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 DPRXA6NFQ7 191 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 NDUFB3O43676 98 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 IGHV3-7P01780 117 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 TRGC2P03986 189 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 PFN1P07737 140 aaKnown RBP7.91□□□□□ -1.14
NPHP3-209ENST00000493732 BTF3P20290 206 aaKnown RBP7.91□□□□□ -1.14
NPHP3-209ENST00000493732 GALR1P47211 349 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 FAM3BP58499 235 aaPredicted RBP7.91□□□□□ -1.14
NPHP3-209ENST00000493732 CCL8P80075 99 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 LCN2P80188 198 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 LRRC10Q5BKY1 277 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 CST9LP1Q5W188 147 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 SPNS3Q6ZMD2 512 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 TCF23Q7RTU1 214 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 C16orf82Q7Z2V1 217 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 OR51G1Q8NGK1 321 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 ZCCHC14Q8WYQ9 949 aaKnown RBP7.91□□□□□ -1.14
NPHP3-209ENST00000493732 NEUROG1Q92886 237 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 LEAP2Q969E1 77 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 SLC35E1Q96K37 410 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 PITPNC1Q9UKF7 332 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 CNOT1A5YKK6 2376 aaKnown RBP7.91□□□□□ -1.14
NPHP3-209ENST00000493732 PRR14LQ5THK1 2151 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 INS-IGF2F8WCM5 200 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 TMEM178BH3BS89 294 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 YIF1AO95070 293 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 CA2P00918 260 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 CT45A6P0DMU7 189 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 CT45A5P0DMU8 189 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 CT45A7P0DMV0 189 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 GNG10P50151 68 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 BSPH1Q075Z2 132 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 C2orf83Q53S99 150 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 TMEM144Q7Z5S9 345 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 LINC00311Q8N616 119 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 TMEM186Q96B77 213 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 UHRF2Q96PU4 802 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 OR51M1Q9H341 326 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 NIT2Q9NQR4 276 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 SVILO95425 2214 aa7.91□□□□□ -1.14
NPHP3-209ENST00000493732 DIDO1Q9BTC0 2240 aaKnown RBP7.9□□□□□ -1.14
NPHP3-209ENST00000493732 ATXN7O15265 892 aaPredicted RBP7.9□□□□□ -1.14
NPHP3-209ENST00000493732 ERHP84090 104 aaKnown RBP7.9□□□□□ -1.14
NPHP3-209ENST00000493732 DNLZQ5SXM8 178 aa7.9□□□□□ -1.14
NPHP3-209ENST00000493732 NCMAPQ5T1S8 102 aa7.9□□□□□ -1.14
NPHP3-209ENST00000493732 MIC13Q5XKP0 118 aa7.9□□□□□ -1.14
NPHP3-209ENST00000493732 C1orf229Q6ZS94 237 aaPredicted RBP7.9□□□□□ -1.14
NPHP3-209ENST00000493732 PNKDQ8N490 385 aa7.9□□□□□ -1.14
NPHP3-209ENST00000493732 OR1L8Q8NGR8 309 aa7.9□□□□□ -1.14
NPHP3-209ENST00000493732 TMEM170AQ8WVE7 144 aa7.9□□□□□ -1.14
NPHP3-209ENST00000493732 CACNG8Q8WXS5 425 aa7.9□□□□□ -1.14
NPHP3-209ENST00000493732 RND1Q92730 232 aa7.9□□□□□ -1.14
NPHP3-209ENST00000493732 PATZ1Q9HBE1 687 aaKnown RBP7.9□□□□□ -1.14
NPHP3-209ENST00000493732 TMEM167BQ9NRX6 74 aa7.9□□□□□ -1.14
NPHP3-209ENST00000493732 KAAG1Q9UBP8 84 aa7.9□□□□□ -1.14
NPHP3-209ENST00000493732 DOCK11Q5JSL3 2073 aa7.9□□□□□ -1.14
NPHP3-209ENST00000493732 HCFC1P51610 2035 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 TANC2Q9HCD6 1990 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 A0A1W2PN81 502 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 GGCTO75223 188 aaKnown RBP7.9□□□□□ -1.15
NPHP3-209ENST00000493732 TYMSP04818 313 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 TRGC1P0CF51 173 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 ARL14EPLP0DKL9 152 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 USF1P22415 310 aaPredicted RBP7.9□□□□□ -1.15
NPHP3-209ENST00000493732 CHRNA7P36544 502 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 TMEM177Q53S58 311 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 ARSJQ5FYB0 599 aaPredicted RBP7.9□□□□□ -1.15
NPHP3-209ENST00000493732 C22orf34Q6ZV56 151 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 PDPNQ86YL7 162 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 MRPL41Q8IXM3 137 aaKnown RBP7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms