RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 DEFB110Q30KQ9 67 aa8.07□□□□□ -1.12
VPS8-225ENST00000492449 LINC01545Q5VT33 79 aa8.07□□□□□ -1.12
VPS8-225ENST00000492449 ZNF788Q6ZQV5 615 aa8.07□□□□□ -1.12
VPS8-225ENST00000492449 FGFRL1Q8N441 504 aa8.07□□□□□ -1.12
VPS8-225ENST00000492449 RNASE7Q9H1E1 156 aaKnown RBP8.07□□□□□ -1.12
VPS8-225ENST00000492449 MRPL16Q9NX20 251 aaKnown RBP8.07□□□□□ -1.12
VPS8-225ENST00000492449 SIGLEC8Q9NYZ4 499 aa8.07□□□□□ -1.12
VPS8-225ENST00000492449 ZNF257Q9Y2Q1 563 aa8.07□□□□□ -1.12
VPS8-225ENST00000492449 PRRC2BQ5JSZ5 2229 aaKnown RBP8.07□□□□□ -1.12
VPS8-225ENST00000492449 SPAARA0A1B0GVQ0 90 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 OOSP2Q86WS3 158 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 SFTPA1Q8IWL2 248 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 TMEM251Q8N6I4 163 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 CCL4L1Q8NHW4 92 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 BLNKQ8WV28 456 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 DEC1Q9P2X7 70 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 COPS7AQ9UBW8 275 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 JPT1Q9UK76 154 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 HELTA6NFD8 242 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 LAMTOR5O43504 91 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 LEPROTL1O95214 131 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 CLDN14O95500 239 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 IGLV2-8P01709 118 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 ADH4P08319 380 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 LTC4SQ16873 150 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 KRTAP27-1Q3LI81 207 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 GDF5OSQ5U4N7 250 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 CARD17Q5XLA6 110 aa8.06□□□□□ -1.12
VPS8-225ENST00000492449 TNRC6BQ9UPQ9 1833 aaKnown RBP8.05□□□□□ -1.12
VPS8-225ENST00000492449 FABP2P12104 132 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 CYB561P49447 251 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 CEBPDP49716 269 aaPredicted RBP8.05□□□□□ -1.12
VPS8-225ENST00000492449 FGF12P61328 243 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 SLC35B1P78383 322 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 RPL24P83731 157 aaKnown RBP8.05□□□□□ -1.12
VPS8-225ENST00000492449 NOGQ13253 232 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 IBA57Q5T440 356 aaKnown RBP8.05□□□□□ -1.12
VPS8-225ENST00000492449 ATP5L2Q7Z4Y8 100 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 TMEM54Q969K7 222 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 MAP1LC3CQ9BXW4 147 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 PRDM6Q9NQX0 595 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 SPANXB1Q9NS25 103 aaPredicted RBP8.05□□□□□ -1.12
VPS8-225ENST00000492449 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.05□□□□□ -1.12
VPS8-225ENST00000492449 C2orf72A6NCS6 295 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 TLX3O43711 291 aaPredicted RBP8.05□□□□□ -1.12
VPS8-225ENST00000492449 EFNA2O43921 213 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 RPL8P62917 257 aaKnown RBP8.05□□□□□ -1.12
VPS8-225ENST00000492449 C17orf67Q0P5P2 114 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 TIGITQ495A1 244 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 SPATA46Q5T0L3 261 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 FAM231DQ6ZW35 169 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 SFTPA2Q8IWL1 248 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 NHLRC2Q8NBF2 726 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 OR4A16Q8NH70 328 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 MMABQ96EY8 250 aaPredicted RBP8.05□□□□□ -1.12
VPS8-225ENST00000492449 IGF2BP2-AS1Q96M15 143 aa8.05□□□□□ -1.12
VPS8-225ENST00000492449 A0A1W2PP55 124 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 A0A1W2PQU0 124 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 LIPFP07098 398 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 TCL1AP56279 114 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 EDDM3BP56851 147 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 PPP1CAP62136 330 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 FOXE3Q13461 319 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 FXYD3Q14802 87 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 C2orf27AQ580R0 203 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 TMEM164Q5U3C3 297 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 PQLC2Q6ZP29 291 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 LINC00596Q86U02 117 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 DOLPP1Q86YN1 238 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 ZNF611Q8N823 705 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 ZNF418Q8TF45 676 aaPredicted RBP8.04□□□□□ -1.12
VPS8-225ENST00000492449 LRRC29Q8WV35 223 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 FAM110AQ9BQ89 295 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 hCG_38984A0A1B0GV85 526 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 VWC2LB2RUY7 222 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 F8W1H4 67 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.04□□□□□ -1.12
VPS8-225ENST00000492449 APOA2P02652 100 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 HNRNPA1P09651 372 aaKnown RBP eCLIP8.04□□□□□ -1.12
VPS8-225ENST00000492449 TMPRSS3P57727 454 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 OR9G4Q8NGQ1 327 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 CLCF1Q9UBD9 225 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 ARHGEF17Q96PE2 2063 aaPredicted RBP8.04□□□□□ -1.12
VPS8-225ENST00000492449 A0A1B0GXF2 115 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 C15orf62A8K5M9 175 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 TMEM150CB9EJG8 249 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 ZG16O60844 167 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 TIMM23BQ5SRD1 257 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 PRAMEF5Q5TYX0 476 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 PRAMEF6Q5VXH4 476 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 LINC00173Q6ZV60 143 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 GCSAMQ8N6F7 178 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 TEX45Q8NA69 505 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 MS4A5Q9H3V2 200 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 IL36RNQ9UBH0 155 aa8.04□□□□□ -1.12
VPS8-225ENST00000492449 H3BML4 177 aa8.03□□□□□ -1.12
VPS8-225ENST00000492449 SLC25A17O43808 307 aa8.03□□□□□ -1.12
VPS8-225ENST00000492449 ZIC3O60481 467 aa8.03□□□□□ -1.12
VPS8-225ENST00000492449 LINC00271P0C7V0 271 aa8.03□□□□□ -1.12
VPS8-225ENST00000492449 IGFBP2P18065 325 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms