RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 RPS10P46783 165 aaKnown RBP3.81□□□□□ -1.8
RTN4-215ENST00000491592 EFNA3P52797 238 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 NDUFA6P56556 154 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 TAS2R46P59540 309 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 RPS20P60866 119 aaKnown RBP3.81□□□□□ -1.8
RTN4-215ENST00000491592 CKS1BP61024 79 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 SLC35A1P78382 337 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 PSG4Q00888 419 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 ZNF117Q03924 483 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 SMAGPQ0VAQ4 97 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 GAGE5Q13069 117 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 GAGE6Q13070 117 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 NSDHLQ15738 373 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 MESTQ5EB52 335 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 WDR38Q5JTN6 314 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 GLYATL3Q5SZD4 288 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 RPL7L1Q6DKI1 246 aaKnown RBP3.81□□□□□ -1.8
RTN4-215ENST00000491592 C12orf54Q6X4T0 127 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 SPNS3Q6ZMD2 512 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 ADAMTSL5Q6ZMM2 481 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 FAM71E2Q8N5Q1 922 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 ZNF283Q8N7M2 679 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 ZNF614Q8N883 585 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 LINC01555Q8NAE3 123 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 SUMF2Q8NBJ7 301 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 MFSD8Q8NHS3 518 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 OTOSQ8NHW6 89 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 SPATA3Q8NHX4 192 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 ZNRF4Q8WWF5 429 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 BORCS7Q96B45 105 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 MUCL1Q96DR8 90 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 C20orf144Q9BQM9 153 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 MAP1LC3BQ9GZQ8 125 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 EIF5A2Q9GZV4 153 aaKnown RBP3.81□□□□□ -1.8
RTN4-215ENST00000491592 SRMSQ9H3Y6 488 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 FBXL15Q9H469 300 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 VSIRQ9H7M9 311 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 WFDC1Q9HC57 220 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 SPHK2Q9NRA0 654 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 TMEM242Q9NWH2 141 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 HDGFL3Q9Y3E1 203 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 SCN5AQ14524 2016 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 SCN3AQ9NY46 2000 aa3.81□□□□□ -1.8
RTN4-215ENST00000491592 A0A1B0GV50 99 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 TMEM269A0A1B0GVZ9 245 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 TMEM235A6NFC5 223 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 TLCD2A6NGC4 264 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 ZNF860A6NHJ4 632 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 MSGN1A6NI15 193 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 IFITM10A6NMD0 228 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 K7EMT4 169 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 CDX4O14627 284 aaPredicted RBP3.8□□□□□ -1.8
RTN4-215ENST00000491592 ZNF354AO60765 605 aaPredicted RBP3.8□□□□□ -1.8
RTN4-215ENST00000491592 GGCTO75223 188 aaKnown RBP3.8□□□□□ -1.8
RTN4-215ENST00000491592 CA11O75493 328 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 DEDDO75618 318 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 YIF1AO95070 293 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 SLC35G6P0C7Q6 338 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 GABRG2P18507 467 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 USF1P22415 310 aaPredicted RBP3.8□□□□□ -1.8
RTN4-215ENST00000491592 FCGR2CP31995 323 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 RBMXP38159 391 aaKnown RBP3.8□□□□□ -1.8
RTN4-215ENST00000491592 UBE2E1P51965 193 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 BIDP55957 195 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 PIGPP57054 158 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 RPS23P62266 143 aaKnown RBP3.8□□□□□ -1.8
RTN4-215ENST00000491592 RPL24P83731 157 aaKnown RBP3.8□□□□□ -1.8
RTN4-215ENST00000491592 ZNF616Q08AN1 781 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 EIF3IQ13347 325 aaKnown RBP3.8□□□□□ -1.8
RTN4-215ENST00000491592 PLPPR5Q32ZL2 321 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 FAM120AOSQ5T036 256 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 NCMAPQ5T1S8 102 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 AKR1C8PQ5T2L2 129 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 TMEM78Q5T7P6 136 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 TMEM215Q68D42 235 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 SLC35E3Q7Z769 313 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 MRPL55Q7Z7F7 128 aaKnown RBP3.8□□□□□ -1.8
RTN4-215ENST00000491592 GKN2Q86XP6 184 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 DOLPP1Q86YN1 238 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 HIST3H2BBQ8N257 126 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 SLC22A24Q8N4F4 322 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 ZNF615Q8N8J6 731 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 CHST4Q8NCG5 386 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 OR10G4Q8NGN3 311 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 OR10D4PQ8NGN7 298 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 OR2K2Q8NGT1 345 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 OR10AC1Q8NH08 325 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 OR51E1Q8TCB6 317 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 SLC37A2Q8TED4 501 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 TVP23CQ96ET8 276 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 SLC25A44Q96H78 314 aaPredicted RBP3.8□□□□□ -1.8
RTN4-215ENST00000491592 UBE2E2Q96LR5 201 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 IP6K3Q96PC2 410 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 CDX2Q99626 313 aaPredicted RBP3.8□□□□□ -1.8
RTN4-215ENST00000491592 RARRES2Q99969 163 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 OVOL2Q9BRP0 275 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 SLC25A39Q9BZJ4 359 aaPredicted RBP3.8□□□□□ -1.8
RTN4-215ENST00000491592 ZDHHC11Q9H8X9 412 aa3.8□□□□□ -1.8
RTN4-215ENST00000491592 PLEKHA3Q9HB20 300 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms