RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 DUX3Q96PT4 197 aa12.65□□□□□ -0.38
MSH5-SAPCD1-206ENST00000491552 FYTTD1Q96QD9 318 aaKnown RBP12.65□□□□□ -0.38
MSH5-SAPCD1-206ENST00000491552 OR5B12Q96R08 314 aa12.65□□□□□ -0.38
MSH5-SAPCD1-206ENST00000491552 P2RX4Q99571 388 aa12.65□□□□□ -0.38
MSH5-SAPCD1-206ENST00000491552 COA4Q9NYJ1 87 aa12.65□□□□□ -0.38
MSH5-SAPCD1-206ENST00000491552 C3orf85A0A1B0GTC6 90 aa12.64□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 A6NHS1 94 aa12.64□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 HMX3A6NHT5 357 aa12.64□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 I3L521 148 aa12.64□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 BRI3O95415 125 aa12.64□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 MYOD1P15172 320 aa12.64□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 SLC25A42Q86VD7 318 aa12.64□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 MRPL41Q8IXM3 137 aaKnown RBP12.64□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 GDPD1Q8N9F7 314 aa12.64□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 WFDC9Q8NEX5 89 aa12.64□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 TP53RKQ96S44 253 aa12.64□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 GPR132Q9UNW8 380 aa12.64□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 WNK1Q9H4A3 2382 aa12.64□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 VWFP04275 2813 aa12.64□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 A0A1B0GW64 132 aa12.63□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 E7EUB6 86 aa12.63□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 IGKV1-39P01597 117 aa12.63□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 IGKV1D-39P04432 117 aa12.63□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 LGALS1P09382 135 aaKnown RBP12.63□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 TTC9CQ8N5M4 171 aa12.63□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 DEDD2Q8WXF8 326 aa12.63□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 SCGB3A2Q96PL1 93 aa12.63□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 RTBDNQ9BSG5 229 aaPredicted RBP12.63□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 COMMD5Q9GZQ3 224 aa12.63□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 C5orf66Q9H5L9 145 aa12.63□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 CMYA5Q8N3K9 4069 aa12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 PKD1L1Q8TDX9 2849 aa12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 CGB1A6NKQ9 187 aa12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 B3GALNT1O75752 331 aa12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 SNAPC5O75971 98 aa12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 IGHV3-11P01762 117 aa12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 RAB25P57735 213 aa12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 OR2B8PP59922 312 aa12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 TRIQKQ629K1 86 aa12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 ZNF57Q68EA5 555 aaPredicted RBP12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 OR11H1Q8NG94 326 aa12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 SEC22AQ96IW7 307 aa12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 TSC22D3Q99576 134 aa12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 ALX4Q9H161 411 aaPredicted RBP12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 NAA60Q9H7X0 242 aa12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 ZNF257Q9Y2Q1 563 aa12.62□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 A0A0G2JLM5 398 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 TEX13DA0A0J9YY54 714 aaPredicted RBP12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 C13orf42A0A1B0GVH6 325 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 NPIPB5A8MRT5 1133 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 G3V4G9 280 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 UCP1P25874 307 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 INPP1P49441 399 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 DEFA5Q01523 94 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 ZNF616Q08AN1 781 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 FHL3Q13643 280 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 BAK1Q16611 211 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 TRIM16LQ309B1 348 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 CNPY1Q3B7I2 92 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 SAMD5Q5TGI4 173 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 THOC7Q6I9Y2 204 aaKnown RBP12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 H2BFWTQ7Z2G1 175 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 C1QL4Q86Z23 238 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 OR1N2Q8NGR9 330 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 RCC1LQ96I51 464 aaKnown RBP12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 QTRT1Q9BXR0 403 aaKnown RBP12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 PRNDQ9UKY0 176 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 NSG2Q9Y328 171 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 MGAM2Q2M2H8 2515 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 TNCP24821 2201 aa12.61□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 CRYM-AS1A6NIL9 109 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 C15orf61A6NNL5 157 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 ATG12O94817 140 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 PRH1P02810 166 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 OR5AC1P0C628 307 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 OR8U8P0C7N1 319 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 AREGP15514 252 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 IGLL1P15814 213 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 PSMB6P28072 239 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 ZNF45Q02386 682 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 SP6Q3SY56 376 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 OXLD1Q5BKU9 147 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 OR1L8Q8NGR8 309 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 DPF1Q92782 380 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 USMG5Q96IX5 58 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 SDHCQ99643 169 aaPredicted RBP12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 SRSF8Q9BRL6 282 aaKnown RBP12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 OR51B2Q9Y5P1 312 aa12.6□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 TRBV9A0A0B4J1U6 114 aa12.59□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 TEX50A0A1B0GTY4 177 aa12.59□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 FAM223BA6NKX1 122 aa12.59□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 DUS4LO95620 317 aaKnown RBP12.59□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 CRYGCP07315 174 aa12.59□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 TRAPPC2P0DI81 140 aa12.59□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 TRAPPC2BP0DI82 140 aa12.59□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 CTRB1P17538 263 aa12.59□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 AKR1C2P52895 323 aa12.59□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 RHOGP84095 191 aa12.59□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 CTRB2Q6GPI1 263 aa12.59□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 FAM223AQ8IWN6 122 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms