RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 XKRY2A2RUG3 117 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 ATRAIDQ6UW56 229 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 C16orf82Q7Z2V1 217 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 C11orf53Q8IXP5 236 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 AAMDCQ9H7C9 122 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 DNAJC4Q9NNZ3 241 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 DOK5Q9P104 306 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 GPR179Q6PRD1 2367 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 A0A0G2JRQ6 117 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 HYPMO75409 117 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 C8orf88P0DMB2 117 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 FAM3BP58499 235 aaPredicted RBP6.08□□□□□ -1.44
NPHP3-208ENST00000490993 TEX36Q5VZQ5 186 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 OR2T6Q8NHC8 308 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 HIST1H2BAQ96A08 127 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 PAXXQ9BUH6 204 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 GNB4Q9HAV0 340 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 PTPRZ1P23471 2315 aaPredicted RBP6.08□□□□□ -1.44
NPHP3-208ENST00000490993 ARL14EPLP0DKL9 152 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 CTRB1P17538 263 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 MST1LQ2TV78 715 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 CTRB2Q6GPI1 263 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 PPP1R14DQ9NXH3 145 aa6.08□□□□□ -1.44
NPHP3-208ENST00000490993 LINC00473A8K010 186 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 ZNF705FA8MVS1 300 aaPredicted RBP6.07□□□□□ -1.44
NPHP3-208ENST00000490993 LINC00869P0C866 280 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 ZNF705DP0CH99 300 aaPredicted RBP6.07□□□□□ -1.44
NPHP3-208ENST00000490993 ZNF705BP0CI00 300 aaPredicted RBP6.07□□□□□ -1.44
NPHP3-208ENST00000490993 SAA1P0DJI8 122 aaPredicted RBP6.07□□□□□ -1.44
NPHP3-208ENST00000490993 RPL29P47914 159 aaKnown RBP6.07□□□□□ -1.44
NPHP3-208ENST00000490993 LYZP61626 148 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 C4orf17Q53FE4 359 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 TMEM144Q7Z5S9 345 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 NABP2Q9BQ15 211 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 NDFIP1Q9BT67 221 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 NIT2Q9NQR4 276 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 HIGD1AQ9Y241 93 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 ZNF705GA8MUZ8 300 aaPredicted RBP6.07□□□□□ -1.44
NPHP3-208ENST00000490993 FAM106CPP0CH98 169 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 GCHFRP30047 84 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 PPOXP50336 477 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 PAX5Q02548 391 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 Q6ZRM9 215 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 CYP2G1PQ6ZSU1 146 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 SLC25A48Q6ZT89 311 aaKnown RBP6.07□□□□□ -1.44
NPHP3-208ENST00000490993 TEX45Q8NA69 505 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 FUT9Q9Y231 359 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 DNAH12Q6ZR08 3092 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 FER1L5A0AVI2 2057 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 TRAV30A0A087WSZ9 112 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 C15orf65H3BRN8 121 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 GATCO43716 136 aaKnown RBP6.07□□□□□ -1.44
NPHP3-208ENST00000490993 GNG7O60262 68 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 NDUFB4O95168 129 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 CCL3L1P16619 93 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 TMEM200BQ69YZ2 307 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 RPRMLQ8N4K4 120 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 Q8WTZ3 238 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 PARLQ9H300 379 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 FNDC10F2Z333 226 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 SMIM6P0DI80 62 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 RELBQ01201 579 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 C9orf152Q5JTZ5 239 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 PNKDQ8N490 385 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 SSBP3Q9BWW4 388 aaPredicted RBP6.07□□□□□ -1.44
NPHP3-208ENST00000490993 LPAR2Q9HBW0 351 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 TNFRSF19Q9NS68 423 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 DPM3Q9P2X0 92 aa6.07□□□□□ -1.44
NPHP3-208ENST00000490993 MEOX2P50222 304 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 NCOR1O75376 2440 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 DNAJC13O75165 2243 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 IGHV3-72A0A0B4J1Y9 119 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 YIF1AO95070 293 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 SCGB1D1O95968 90 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 SPNS3Q6ZMD2 512 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 SDF2L1Q9HCN8 221 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 ARID1AO14497 2285 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 RND2P52198 227 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 PAX9P55771 341 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 CD81P60033 236 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 EFNB3Q15768 340 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 USF2Q15853 346 aaPredicted RBP6.06□□□□□ -1.44
NPHP3-208ENST00000490993 C2orf83Q53S99 150 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 FAM222BQ8WU58 562 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 RNF5Q99942 180 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 PITPNC1Q9UKF7 332 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 PCNX3Q9H6A9 2034 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 LOC105371267A0A1B0GV96 52 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 IGKV1-39P01597 117 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 IGKV1D-39P04432 117 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 SELLP14151 372 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 FOSL1P15407 271 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 CLEC12BQ2HXU8 276 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 BLNKQ8WV28 456 aa6.06□□□□□ -1.44
NPHP3-208ENST00000490993 FOXH1O75593 365 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 PDLIM4P50479 330 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 ARF6P62330 175 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 C10orf91Q5T1B1 145 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 SMIM15Q7Z3B0 74 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 FAM186AA6NE01 2351 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms