RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 SPTBN4Q9H254 2564 aa12.93□□□□□ -0.34
BRD9-208ENST00000489816 ZNF891A8MT65 544 aaPredicted RBP12.93□□□□□ -0.34
BRD9-208ENST00000489816 TIMM23BQ5SRD1 257 aa12.93□□□□□ -0.34
BRD9-208ENST00000489816 ASPHD1Q5U4P2 390 aa12.93□□□□□ -0.34
BRD9-208ENST00000489816 OR10A7Q8NGE5 316 aa12.93□□□□□ -0.34
BRD9-208ENST00000489816 NEIL1Q96FI4 390 aaPredicted RBP12.93□□□□□ -0.34
BRD9-208ENST00000489816 OR5B12Q96R08 314 aa12.93□□□□□ -0.34
BRD9-208ENST00000489816 TCEAL7Q9BRU2 100 aa12.93□□□□□ -0.34
BRD9-208ENST00000489816 TIMM9Q9Y5J7 89 aa12.93□□□□□ -0.34
BRD9-208ENST00000489816 WNK2Q9Y3S1 2297 aa12.92□□□□□ -0.34
BRD9-208ENST00000489816 CCL3L1P16619 93 aa12.92□□□□□ -0.34
BRD9-208ENST00000489816 SPCS3P61009 180 aa12.92□□□□□ -0.34
BRD9-208ENST00000489816 GNB2P62879 340 aa12.92□□□□□ -0.34
BRD9-208ENST00000489816 HIST3H2BBQ8N257 126 aa12.92□□□□□ -0.34
BRD9-208ENST00000489816 FUT9Q9Y231 359 aa12.92□□□□□ -0.34
BRD9-208ENST00000489816 A0A1B0GUS0 222 aa12.92□□□□□ -0.34
BRD9-208ENST00000489816 YPEL1O60688 119 aa12.92□□□□□ -0.34
BRD9-208ENST00000489816 MBP02144 154 aa12.92□□□□□ -0.34
BRD9-208ENST00000489816 FAM78BQ5VT40 261 aa12.92□□□□□ -0.34
BRD9-208ENST00000489816 RBMXL3Q8N7X1 1067 aaKnown RBP12.92□□□□□ -0.34
BRD9-208ENST00000489816 YPEL2Q96QA6 119 aa12.92□□□□□ -0.34
BRD9-208ENST00000489816 LRFN3Q9BTN0 628 aa12.92□□□□□ -0.34
BRD9-208ENST00000489816 OR51M1Q9H341 326 aa12.92□□□□□ -0.34
BRD9-208ENST00000489816 TRGV10A0A0A0MS01 117 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 PPP5D1E7EU14 171 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 ARSJQ5FYB0 599 aaPredicted RBP12.91□□□□□ -0.34
BRD9-208ENST00000489816 CENPVQ7Z7K6 275 aaPredicted RBP12.91□□□□□ -0.34
BRD9-208ENST00000489816 RNF7Q9UBF6 113 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 NCOR2Q9Y618 2525 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 SRRM4A7MD48 611 aaKnown RBP12.91□□□□□ -0.34
BRD9-208ENST00000489816 CA2P00918 260 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 PFN1P07737 140 aaKnown RBP12.91□□□□□ -0.34
BRD9-208ENST00000489816 TCF23Q7RTU1 214 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 OR10W1Q8NGF6 305 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 CCL17Q92583 94 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 MAP1AP78559 2803 aaPredicted RBP12.91□□□□□ -0.34
BRD9-208ENST00000489816 DSCAML1Q8TD84 2053 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 SCO2A0A1W2PP80 73 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 VDAC2P45880 294 aaPredicted RBP12.91□□□□□ -0.34
BRD9-208ENST00000489816 RND2P52198 227 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 SELENOVP59797 346 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 FAM209BQ5JX69 171 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 FAM216AQ8WUB2 273 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 GGTLC1Q9BX51 225 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 CHD8Q9HCK8 2581 aa12.91□□□□□ -0.34
BRD9-208ENST00000489816 KBTBD11-OT1A0A1B0GTJ5 212 aa12.9□□□□□ -0.34
BRD9-208ENST00000489816 SEC14L6B5MCN3 397 aa12.9□□□□□ -0.34
BRD9-208ENST00000489816 APELAP0DMC3 54 aa12.9□□□□□ -0.34
BRD9-208ENST00000489816 IGFBP2P18065 325 aa12.9□□□□□ -0.34
BRD9-208ENST00000489816 C1orf185Q5T7R7 199 aa12.9□□□□□ -0.34
BRD9-208ENST00000489816 H1FXQ92522 213 aaKnown RBP12.9□□□□□ -0.34
BRD9-208ENST00000489816 CD40P25942 277 aa12.9□□□□□ -0.34
BRD9-208ENST00000489816 C1orf159Q96HA4 380 aa12.9□□□□□ -0.34
BRD9-208ENST00000489816 TRBV20OR9-2A0A075B6H5 130 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 LHBP01229 141 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 MZT1Q08AG7 82 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 DIAPH2-AS1Q14236 149 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 GAMTQ14353 236 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 PFDN5Q99471 154 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 NPY1RP25929 384 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 OR4P4Q8NGL7 312 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 OR4S2Q8NH73 311 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 ZCCHC14Q8WYQ9 949 aaKnown RBP12.89□□□□□ -0.35
BRD9-208ENST00000489816 ENY2Q9NPA8 101 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 ARHGAP32A7KAX9 2087 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 RAI1Q7Z5J4 1906 aaPredicted RBP12.89□□□□□ -0.35
BRD9-208ENST00000489816 TMEM250H0YL14 139 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 RBFOX2O43251 390 aaKnown RBP eCLIP12.89□□□□□ -0.354e-9■■■■□ 22.7
BRD9-208ENST00000489816 CTAG1AP78358 180 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 LHFPL4Q7Z7J7 247 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 SLC24A4Q8NFF2 622 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 PACRGQ96M98 296 aaPredicted RBP12.89□□□□□ -0.35
BRD9-208ENST00000489816 PARD6GQ9BYG4 376 aaPredicted RBP12.89□□□□□ -0.35
BRD9-208ENST00000489816 MANBALQ9NQG1 85 aa12.89□□□□□ -0.35
BRD9-208ENST00000489816 ANKHD1Q8IWZ3 2542 aaKnown RBP12.89□□□□□ -0.35
BRD9-208ENST00000489816 TRBV24-1A0A075B6N3 115 aa12.88□□□□□ -0.35
BRD9-208ENST00000489816 A8MXE2 369 aa12.88□□□□□ -0.35
BRD9-208ENST00000489816 F2RL2O00254 374 aa12.88□□□□□ -0.35
BRD9-208ENST00000489816 SPINK4O60575 86 aa12.88□□□□□ -0.35
BRD9-208ENST00000489816 IGHV2-70P01814 119 aa12.88□□□□□ -0.35
BRD9-208ENST00000489816 CCKARP32238 428 aa12.88□□□□□ -0.35
BRD9-208ENST00000489816 GAFA1Q96PS6 74 aa12.88□□□□□ -0.35
BRD9-208ENST00000489816 XKRY2A2RUG3 117 aa12.88□□□□□ -0.35
BRD9-208ENST00000489816 OR10J4P0C629 311 aa12.88□□□□□ -0.35
BRD9-208ENST00000489816 VWC2Q2TAL6 325 aa12.88□□□□□ -0.35
BRD9-208ENST00000489816 PRR30Q53SZ7 412 aaPredicted RBP12.88□□□□□ -0.35
BRD9-208ENST00000489816 STPG3Q8N7X2 389 aa12.88□□□□□ -0.35
BRD9-208ENST00000489816 ABHD17AQ96GS6 310 aa12.88□□□□□ -0.35
BRD9-208ENST00000489816 HIST1H2BLQ99880 126 aa12.88□□□□□ -0.35
BRD9-208ENST00000489816 TP53TG5Q9Y2B4 290 aa12.88□□□□□ -0.35
BRD9-208ENST00000489816 YTHDF2Q9Y5A9 579 aaKnown RBP12.88□□□□□ -0.35
BRD9-208ENST00000489816 ZNF320A2RRD8 509 aa12.87□□□□□ -0.35
BRD9-208ENST00000489816 IL6RP08887 468 aaPredicted RBP12.87□□□□□ -0.35
BRD9-208ENST00000489816 TRAT1Q6PIZ9 186 aa12.87□□□□□ -0.35
BRD9-208ENST00000489816 Q6ZS92 163 aa12.87□□□□□ -0.35
BRD9-208ENST00000489816 LINC01551Q86U37 167 aa12.87□□□□□ -0.35
BRD9-208ENST00000489816 IDI2-AS1Q9NZ38 188 aa12.87□□□□□ -0.35
BRD9-208ENST00000489816 OR51B2Q9Y5P1 312 aa12.87□□□□□ -0.35
BRD9-208ENST00000489816 J3QR06 171 aa12.87□□□□□ -0.35
BRD9-208ENST00000489816 SLC17A3O00476 420 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms