RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 PHB2Q99623 299 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 RTBDNQ9BSG5 229 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-212ENST00000489728 CCDC32Q9BV29 185 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 COMMD5Q9GZQ3 224 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 C5orf66Q9H5L9 145 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 AKIP1Q9NQ31 210 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 PRNDQ9UKY0 176 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 VSIG4Q9Y279 399 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 FBN3Q75N90 2809 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 TNCP24821 2201 aa8.64□□□□□ -1.03
CPSF7-212ENST00000489728 MGAM2Q2M2H8 2515 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 A0A0G2JLM5 398 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 CRYM-AS1A6NIL9 109 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 NPIPB5A8MRT5 1133 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 TEX22C9J3V5 150 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 SNAPC5O75971 98 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 DHFRP00374 187 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 KRASP01116 189 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 PF4P02776 101 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 OR2B8PP59922 312 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 DHODHQ02127 395 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 KIAA0141Q14154 515 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-212ENST00000489728 KLK9Q2XQG4 91 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 FAM209BQ5JX69 171 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 ZNF57Q68EA5 555 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-212ENST00000489728 TTC9CQ8N5M4 171 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 ADAD2Q8NCV1 583 aaKnown RBP8.63□□□□□ -1.03
CPSF7-212ENST00000489728 OR5B3Q8NH48 314 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 GALNT14Q96FL9 552 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 TP53RKQ96S44 253 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 SDHCQ99643 169 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-212ENST00000489728 TMEM222Q9H0R3 208 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 NAA60Q9H7X0 242 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 KLK9Q9UKQ9 250 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 ZNF257Q9Y2Q1 563 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 TRRAPQ9Y4A5 3859 aa8.63□□□□□ -1.03
CPSF7-212ENST00000489728 WNK1Q9H4A3 2382 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 TEX13DA0A0J9YY54 714 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-212ENST00000489728 FAM223BA6NKX1 122 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 C15orf61A6NNL5 157 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 CENPXA8MT69 81 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 I3L521 148 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 DUS4LO95620 317 aaKnown RBP8.62□□□□□ -1.03
CPSF7-212ENST00000489728 CRYGCP07315 174 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 IL7P13232 177 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 G6PCP35575 357 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 SRPXP78539 464 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 FHL3Q13643 280 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 RBMS2Q15434 407 aaKnown RBP8.62□□□□□ -1.03
CPSF7-212ENST00000489728 BAK1Q16611 211 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 C10orf55Q5SWW7 151 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 H2BFWTQ7Z2G1 175 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 FAM219AQ8IW50 185 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 FAM223AQ8IWN6 122 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 SGPP2Q8IWX5 399 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 MRPL41Q8IXM3 137 aaKnown RBP8.62□□□□□ -1.03
CPSF7-212ENST00000489728 WFDC9Q8NEX5 89 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 IL22RA2Q969J5 263 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 USMG5Q96IX5 58 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 P2RX4Q99571 388 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 QTRT1Q9BXR0 403 aaKnown RBP8.62□□□□□ -1.03
CPSF7-212ENST00000489728 KLK15Q9H2R5 256 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 TMEM14BQ9NUH8 114 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 KCNIP3Q9Y2W7 256 aa8.62□□□□□ -1.03
CPSF7-212ENST00000489728 CCL24O00175 119 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 CDS2O95674 445 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 IGKV1-39P01597 117 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 TRGV3P03979 118 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 IGKV1D-39P04432 117 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 LGALS1P09382 135 aaKnown RBP8.61□□□□□ -1.03
CPSF7-212ENST00000489728 ANXA3P12429 323 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 TPPP2P59282 170 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 UBE2MP61081 183 aaKnown RBP8.61□□□□□ -1.03
CPSF7-212ENST00000489728 TRIM16LQ309B1 348 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 HIST2H2BDQ6DRA6 164 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 ETV3LQ6ZN32 361 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 C8orf86Q6ZUL3 223 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 ZNF429Q86V71 674 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 OR1L8Q8NGR8 309 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 GLYATL2Q8WU03 294 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 RBPMSQ93062 196 aaKnown RBP8.61□□□□□ -1.03
CPSF7-212ENST00000489728 GPR61Q9BZJ8 451 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 WDR12Q9GZL7 423 aaKnown RBP8.61□□□□□ -1.03
CPSF7-212ENST00000489728 COA4Q9NYJ1 87 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 CACFD1Q9UGQ2 172 aa8.61□□□□□ -1.03
CPSF7-212ENST00000489728 TRBV9A0A0B4J1U6 114 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 TRAV3A0A0B4J244 114 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 C13orf42A0A1B0GVH6 325 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 A0A1B0GW64 132 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 IGLC7A0M8Q6 106 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 CGB1A6NKQ9 187 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 CYB5BO43169 146 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 OR5AC1P0C628 307 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 OR8U8P0C7N1 319 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 P0C879 139 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 TRAPPC2P0DI81 140 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 TRAPPC2BP0DI82 140 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 HIST1H1BP16401 226 aaKnown RBP8.6□□□□□ -1.03
CPSF7-212ENST00000489728 CTRB1P17538 263 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 PSMB6P28072 239 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms