RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 NPIPB13A6NJU9 1138 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 NPIPB4C9JG80 1138 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 NPIPB6E9PJ23 425 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 ATP5G2Q06055 141 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 ICAM4Q14773 271 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 CLEC7AQ9BXN2 247 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 CHODLQ9H9P2 273 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 BEX4Q9NWD9 120 aaPredicted RBP14.91□□□□□ -0.02
NPHP4-209ENST00000489180 TDRD6O60522 2096 aaKnown RBP14.91□□□□□ -0.02
NPHP4-209ENST00000489180 TRBV20OR9-2A0A075B6H5 130 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 IGHV3-49A0A0A0MS15 119 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 HOXB1P14653 301 aaPredicted RBP14.91□□□□□ -0.02
NPHP4-209ENST00000489180 RRN3P1Q2M238 152 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 SFXN3Q9BWM7 321 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 IGHV1-69-2A0A0G2JMI3 117 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 OR13A1Q8NGR1 328 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 C19orf24Q9BVV8 132 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 TMEM160Q9NX00 188 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 TBL2Q9Y4P3 447 aaKnown RBP14.91□□□□□ -0.02
NPHP4-209ENST00000489180 STARD6P59095 220 aa14.9□□□□□ -0.02
NPHP4-209ENST00000489180 WDYHV1Q96HA8 205 aa14.9□□□□□ -0.02
NPHP4-209ENST00000489180 DNASE2BQ8WZ79 361 aa14.9□□□□□ -0.02
NPHP4-209ENST00000489180 LOC105371242A0A075B767 164 aa14.9□□□□□ -0.02
NPHP4-209ENST00000489180 IGKV3OR2-268A0A0C4DH90 116 aa14.9□□□□□ -0.02
NPHP4-209ENST00000489180 NDUFA2O43678 99 aa14.9□□□□□ -0.02
NPHP4-209ENST00000489180 VENTXO95231 258 aa14.9□□□□□ -0.02
NPHP4-209ENST00000489180 SCGB1A1P11684 91 aa14.9□□□□□ -0.02
NPHP4-209ENST00000489180 ZNF56Q15929 161 aa14.9□□□□□ -0.02
NPHP4-209ENST00000489180 CLDND2Q8NHS1 167 aa14.9□□□□□ -0.02
NPHP4-209ENST00000489180 TAS2R60P59551 318 aa14.9□□□□□ -0.02
NPHP4-209ENST00000489180 LINC00114Q6XXX2 140 aa14.9□□□□□ -0.02
NPHP4-209ENST00000489180 GALNT14Q96FL9 552 aa14.9□□□□□ -0.02
NPHP4-209ENST00000489180 IL36BQ9NZH7 164 aa14.9□□□□□ -0.02
NPHP4-209ENST00000489180 DICER1Q9UPY3 1922 aaKnown RBP14.9□□□□□ -0.02
NPHP4-209ENST00000489180 LNP1A1A4G5 178 aa14.89□□□□□ -0.03
NPHP4-209ENST00000489180 GATA2P23769 480 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-209ENST00000489180 DDB2Q92466 427 aa14.89□□□□□ -0.03
NPHP4-209ENST00000489180 NPIPB11E5RHQ5 1161 aa14.89□□□□□ -0.03
NPHP4-209ENST00000489180 GATAD1Q8WUU5 269 aa14.89□□□□□ -0.03
NPHP4-209ENST00000489180 GCSAMLQ5JQS6 135 aa14.89□□□□□ -0.03
NPHP4-209ENST00000489180 RNF115Q9Y4L5 304 aa14.89□□□□□ -0.03
NPHP4-209ENST00000489180 TRAV8-6A0A0B4J262 113 aa14.88□□□□□ -0.03
NPHP4-209ENST00000489180 TBX6O95947 436 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-209ENST00000489180 FAM19A2Q8N3H0 131 aa14.88□□□□□ -0.03
NPHP4-209ENST00000489180 TMEM70Q9BUB7 260 aa14.88□□□□□ -0.03
NPHP4-209ENST00000489180 IFI27L2Q9H2X8 130 aa14.88□□□□□ -0.03
NPHP4-209ENST00000489180 ZNF703Q9H7S9 590 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-209ENST00000489180 IGFBP3P17936 291 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-209ENST00000489180 UCP1P25874 307 aa14.88□□□□□ -0.03
NPHP4-209ENST00000489180 MIR17HGQ75NE6 70 aa14.88□□□□□ -0.03
NPHP4-209ENST00000489180 RNF126Q9BV68 326 aa14.88□□□□□ -0.03
NPHP4-209ENST00000489180 A0A1B0GTI1 187 aa14.88□□□□□ -0.03
NPHP4-209ENST00000489180 HIST1H1AQ02539 215 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-209ENST00000489180 LINC01560Q8TB33 94 aa14.88□□□□□ -0.03
NPHP4-209ENST00000489180 ATXN7O15265 892 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-209ENST00000489180 Q6ZT83 130 aa14.87□□□□□ -0.03
NPHP4-209ENST00000489180 FAM216BQ8N7L0 139 aa14.87□□□□□ -0.03
NPHP4-209ENST00000489180 LINC00470Q9BZP3 86 aa14.87□□□□□ -0.03
NPHP4-209ENST00000489180 IGHV3OR16-8A0A075B7F1 116 aa14.87□□□□□ -0.03
NPHP4-209ENST00000489180 NPIPB7O75200 414 aa14.87□□□□□ -0.03
NPHP4-209ENST00000489180 NPPCP23582 126 aa14.87□□□□□ -0.03
NPHP4-209ENST00000489180 PCP4P48539 62 aa14.87□□□□□ -0.03
NPHP4-209ENST00000489180 A1L4Q6 167 aa14.87□□□□□ -0.03
NPHP4-209ENST00000489180 PRR32B1ATL7 298 aa14.87□□□□□ -0.03
NPHP4-209ENST00000489180 FDCSPQ8NFU4 85 aa14.87□□□□□ -0.03
NPHP4-209ENST00000489180 FBXL15Q9H469 300 aa14.87□□□□□ -0.03
NPHP4-209ENST00000489180 PLSCR2Q9NRY7 297 aa14.87□□□□□ -0.03
NPHP4-209ENST00000489180 RBBP6Q7Z6E9 1792 aaKnown RBP14.86□□□□□ -0.03
NPHP4-209ENST00000489180 APOHP02749 345 aaPredicted RBP14.86□□□□□ -0.03
NPHP4-209ENST00000489180 NBEAP1P0C6P0 100 aa14.86□□□□□ -0.03
NPHP4-209ENST00000489180 CECR9P0C854 216 aa14.86□□□□□ -0.03
NPHP4-209ENST00000489180 ZNF414Q96IQ9 312 aa14.86□□□□□ -0.03
NPHP4-209ENST00000489180 TCF23Q7RTU1 214 aa14.86□□□□□ -0.03
NPHP4-209ENST00000489180 SDF2L1Q9HCN8 221 aa14.86□□□□□ -0.03
NPHP4-209ENST00000489180 CELA3BP08861 270 aa14.86□□□□□ -0.03
NPHP4-209ENST00000489180 FAM27E3Q08E93 113 aa14.86□□□□□ -0.03
NPHP4-209ENST00000489180 FAM106AQ4KMX7 169 aa14.86□□□□□ -0.03
NPHP4-209ENST00000489180 ERASQ7Z444 233 aa14.86□□□□□ -0.03
NPHP4-209ENST00000489180 FOXA2Q9Y261 457 aaPredicted RBP14.86□□□□□ -0.03
NPHP4-209ENST00000489180 MYOFQ9NZM1 2061 aa14.86□□□□□ -0.03
NPHP4-209ENST00000489180 LIPFP07098 398 aa14.86□□□□□ -0.03
NPHP4-209ENST00000489180 SMAGPQ0VAQ4 97 aa14.86□□□□□ -0.03
NPHP4-209ENST00000489180 TBR1Q16650 682 aa14.86□□□□□ -0.03
NPHP4-209ENST00000489180 TRAV24A0A0B4J272 114 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 SMIM13P0DJ93 91 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 CA7P43166 264 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 DNM1P46Q6ZS02 220 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 ZNF525Q8N782 197 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 NEUROG3Q9Y4Z2 214 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 TFF1P04155 84 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 EEF1AKMT3Q96AZ1 226 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 PRELID3AQ96N28 172 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 MRPL13Q9BYD1 178 aaKnown RBP14.85□□□□□ -0.03
NPHP4-209ENST00000489180 PARP14Q460N5 1801 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 C9JCJ5 164 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 PEX7O00628 323 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 MEIG1Q5JSS6 88 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 LY6G6FQ5SQ64 297 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 DMRTA1Q5VZB9 504 aa14.85□□□□□ -0.03
NPHP4-209ENST00000489180 DUX5Q96PT3 197 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms