RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 COPZ2Q9P299 210 aa11.7□□□□□ -0.54
CYTH3-209ENST00000488964 MARCH11A6NNE9 402 aa11.69□□□□□ -0.54
CYTH3-209ENST00000488964 OVOL1O14753 267 aa11.69□□□□□ -0.54
CYTH3-209ENST00000488964 CD74P04233 296 aa11.69□□□□□ -0.54
CYTH3-209ENST00000488964 AKAIN1P0CW23 69 aa11.69□□□□□ -0.54
CYTH3-209ENST00000488964 LPAR6P43657 344 aa11.69□□□□□ -0.54
CYTH3-209ENST00000488964 INSL3P51460 131 aa11.69□□□□□ -0.54
CYTH3-209ENST00000488964 BRWD1-AS2P59051 145 aa11.69□□□□□ -0.54
CYTH3-209ENST00000488964 HSD17B13Q7Z5P4 300 aaPredicted RBP11.69□□□□□ -0.54
CYTH3-209ENST00000488964 TBC1D26Q86UD7 250 aa11.69□□□□□ -0.54
CYTH3-209ENST00000488964 TTC9CQ8N5M4 171 aa11.69□□□□□ -0.54
CYTH3-209ENST00000488964 SLC2A9Q9NRM0 540 aa11.69□□□□□ -0.54
CYTH3-209ENST00000488964 FKBP11Q9NYL4 201 aa11.69□□□□□ -0.54
CYTH3-209ENST00000488964 C14orf166Q9Y224 244 aaKnown RBP11.69□□□□□ -0.54
CYTH3-209ENST00000488964 NPIPB5A8MRT5 1133 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 UPK2O00526 184 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 GSTZ1O43708 216 aaPredicted RBP11.68□□□□□ -0.54
CYTH3-209ENST00000488964 B3GALNT1O75752 331 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 ZNF735P0CB33 412 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 DEFA4P12838 97 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 RPA2P15927 270 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 HIST1H1BP16401 226 aaKnown RBP11.68□□□□□ -0.54
CYTH3-209ENST00000488964 FAUP35544 74 aaKnown RBP11.68□□□□□ -0.54
CYTH3-209ENST00000488964 PPP5CP53041 499 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 AP3S2P59780 193 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 RND3P61587 244 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 ATP5G2Q06055 141 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 TATDN3Q17R31 274 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 MRGPRG-AS1Q2M3A8 158 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 C10orf55Q5SWW7 151 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 ASPHD1Q5U4P2 390 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 CADM3Q8N126 398 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 NECAP1Q8NC96 275 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 TERB2Q8NHR7 220 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 PRRT1Q99946 306 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 NDUFA13Q9P0J0 144 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 PRNDQ9UKY0 176 aa11.68□□□□□ -0.54
CYTH3-209ENST00000488964 WIPF1O43516 503 aa11.67□□□□□ -0.54
CYTH3-209ENST00000488964 KRASP01116 189 aa11.67□□□□□ -0.54
CYTH3-209ENST00000488964 PIGPP57054 158 aa11.67□□□□□ -0.54
CYTH3-209ENST00000488964 RHOGP84095 191 aa11.67□□□□□ -0.54
CYTH3-209ENST00000488964 LHFPL1Q86WI0 220 aa11.67□□□□□ -0.54
CYTH3-209ENST00000488964 MRAPQ8TCY5 172 aa11.67□□□□□ -0.54
CYTH3-209ENST00000488964 SCGB3A2Q96PL1 93 aa11.67□□□□□ -0.54
CYTH3-209ENST00000488964 ELOVL1Q9BW60 279 aa11.67□□□□□ -0.54
CYTH3-209ENST00000488964 QTRT1Q9BXR0 403 aaKnown RBP11.67□□□□□ -0.54
CYTH3-209ENST00000488964 NXF2Q9GZY0 626 aaKnown RBP11.67□□□□□ -0.54
CYTH3-209ENST00000488964 ALX4Q9H161 411 aaPredicted RBP11.67□□□□□ -0.54
CYTH3-209ENST00000488964 THYN1Q9P016 225 aa11.67□□□□□ -0.54
CYTH3-209ENST00000488964 SCP2D1Q9UJQ7 156 aa11.67□□□□□ -0.54
CYTH3-209ENST00000488964 IGHV4OR15-8A0A075B7B6 117 aa11.66□□□□□ -0.54
CYTH3-209ENST00000488964 A0A087WW49 117 aa11.66□□□□□ -0.54
CYTH3-209ENST00000488964 H0Y980 276 aa11.66□□□□□ -0.54
CYTH3-209ENST00000488964 PTBP1P26599 531 aaKnown RBP eCLIP11.66□□□□□ -0.54
CYTH3-209ENST00000488964 PSMB6P28072 239 aa11.66□□□□□ -0.54
CYTH3-209ENST00000488964 HOXD3P31249 432 aaPredicted RBP11.66□□□□□ -0.54
CYTH3-209ENST00000488964 TNFSF8P32971 234 aa11.66□□□□□ -0.54
CYTH3-209ENST00000488964 EGFEM1PQ0D2K5 195 aa11.66□□□□□ -0.54
CYTH3-209ENST00000488964 SURF2Q15527 256 aaPredicted RBP11.66□□□□□ -0.54
CYTH3-209ENST00000488964 PYDC2Q56P42 97 aa11.66□□□□□ -0.54
CYTH3-209ENST00000488964 SPANXN2Q5MJ10 180 aa11.66□□□□□ -0.54
CYTH3-209ENST00000488964 H2BFWTQ7Z2G1 175 aa11.66□□□□□ -0.54
CYTH3-209ENST00000488964 ZNF429Q86V71 674 aa11.66□□□□□ -0.54
CYTH3-209ENST00000488964 OR1L8Q8NGR8 309 aa11.66□□□□□ -0.54
CYTH3-209ENST00000488964 DCUN1D4Q92564 292 aa11.66□□□□□ -0.54
CYTH3-209ENST00000488964 OR4C12Q96R67 309 aa11.66□□□□□ -0.54
CYTH3-209ENST00000488964 AURKAIP1Q9NWT8 199 aaPredicted RBP11.66□□□□□ -0.54
CYTH3-209ENST00000488964 PEF1Q9UBV8 284 aaKnown RBP11.66□□□□□ -0.54
CYTH3-209ENST00000488964 MEGF8Q7Z7M0 2845 aa11.65□□□□□ -0.54
CYTH3-209ENST00000488964 ANKRD34BA5PLL1 514 aa11.65□□□□□ -0.54
CYTH3-209ENST00000488964 HMX3A6NHT5 357 aa11.65□□□□□ -0.54
CYTH3-209ENST00000488964 TEX22C9J3V5 150 aa11.65□□□□□ -0.54
CYTH3-209ENST00000488964 RBMXL2O75526 392 aaKnown RBP11.65□□□□□ -0.54
CYTH3-209ENST00000488964 TRAPPC2P0DI81 140 aa11.65□□□□□ -0.54
CYTH3-209ENST00000488964 TRAPPC2BP0DI82 140 aa11.65□□□□□ -0.54
CYTH3-209ENST00000488964 G6PCP35575 357 aa11.65□□□□□ -0.54
CYTH3-209ENST00000488964 SLURP1P55000 103 aa11.65□□□□□ -0.54
CYTH3-209ENST00000488964 OR2B8PP59922 312 aa11.65□□□□□ -0.54
CYTH3-209ENST00000488964 EXOSC2Q13868 293 aaKnown RBP11.65□□□□□ -0.54
CYTH3-209ENST00000488964 RPEL1Q2QD12 228 aa11.65□□□□□ -0.54
CYTH3-209ENST00000488964 TRIM16LQ309B1 348 aa11.65□□□□□ -0.54
CYTH3-209ENST00000488964 ZNF343Q6P1L6 599 aa11.65□□□□□ -0.54
CYTH3-209ENST00000488964 OR5B3Q8NH48 314 aa11.65□□□□□ -0.54
CYTH3-209ENST00000488964 OR4A16Q8NH70 328 aa11.65□□□□□ -0.54
CYTH3-209ENST00000488964 RNASE11Q8TAA1 199 aaKnown RBP11.65□□□□□ -0.54
CYTH3-209ENST00000488964 TMEM56Q96MV1 263 aa11.65□□□□□ -0.54
CYTH3-209ENST00000488964 TEX13DA0A0J9YY54 714 aaPredicted RBP11.64□□□□□ -0.55
CYTH3-209ENST00000488964 SAP30O75446 220 aa11.64□□□□□ -0.55
CYTH3-209ENST00000488964 OR2J3O76001 311 aa11.64□□□□□ -0.55
CYTH3-209ENST00000488964 PRB2P02812 416 aaPredicted RBP11.64□□□□□ -0.55
CYTH3-209ENST00000488964 CRYGCP07315 174 aa11.64□□□□□ -0.55
CYTH3-209ENST00000488964 CTSDP07339 412 aaPredicted RBP11.64□□□□□ -0.55
CYTH3-209ENST00000488964 IL6RP08887 468 aaPredicted RBP11.64□□□□□ -0.55
CYTH3-209ENST00000488964 MECP2P51608 486 aaKnown RBP11.64□□□□□ -0.55
CYTH3-209ENST00000488964 AKR1C2P52895 323 aa11.64□□□□□ -0.55
CYTH3-209ENST00000488964 C15orf32Q32M92 178 aa11.64□□□□□ -0.55
CYTH3-209ENST00000488964 ZNF585BQ52M93 769 aa11.64□□□□□ -0.55
CYTH3-209ENST00000488964 OR4D10Q8NGI6 311 aa11.64□□□□□ -0.55
CYTH3-209ENST00000488964 OR4C16Q8NGL9 310 aa11.64□□□□□ -0.55
CYTH3-209ENST00000488964 OR6Q1Q8NGQ2 317 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms