RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 DUX1O43812 170 aa13.52□□□□□ -0.24
MCF2L-229ENST00000488765 ZNF138P52744 262 aa13.52□□□□□ -0.24
MCF2L-229ENST00000488765 TMEM14EPQ6UXP3 125 aa13.52□□□□□ -0.24
MCF2L-229ENST00000488765 SGK494Q96LW2 274 aa13.52□□□□□ -0.24
MCF2L-229ENST00000488765 FAM234AQ9H0X4 552 aa13.52□□□□□ -0.24
MCF2L-229ENST00000488765 V9GYV3 84 aa13.52□□□□□ -0.24
MCF2L-229ENST00000488765 FER1L5A0AVI2 2057 aa13.52□□□□□ -0.24
MCF2L-229ENST00000488765 PATE3B3GLJ2 98 aa13.52□□□□□ -0.24
MCF2L-229ENST00000488765 NPIPA3F8WFD2 350 aa13.52□□□□□ -0.24
MCF2L-229ENST00000488765 PAX2Q02962 417 aa13.52□□□□□ -0.24
MCF2L-229ENST00000488765 PLXDC1Q8IUK5 500 aa13.52□□□□□ -0.24
MCF2L-229ENST00000488765 C18orf32Q8TCD1 76 aa13.52□□□□□ -0.24
MCF2L-229ENST00000488765 KCNIP2Q9NS61 270 aa13.52□□□□□ -0.24
MCF2L-229ENST00000488765 DEGS1O15121 323 aa13.52□□□□□ -0.25
MCF2L-229ENST00000488765 HAND1O96004 215 aa13.52□□□□□ -0.25
MCF2L-229ENST00000488765 NXPH1P58417 271 aa13.52□□□□□ -0.25
MCF2L-229ENST00000488765 DCAF12Q5T6F0 453 aa13.52□□□□□ -0.25
MCF2L-229ENST00000488765 OR8B3Q8NGG8 313 aa13.52□□□□□ -0.25
MCF2L-229ENST00000488765 OR4A5Q8NH83 315 aa13.52□□□□□ -0.25
MCF2L-229ENST00000488765 PILRBQ9UKJ0 227 aa13.52□□□□□ -0.25
MCF2L-229ENST00000488765 CFAP47Q6ZTR5 3102 aa13.51□□□□□ -0.25
MCF2L-229ENST00000488765 CGAP01215 116 aa13.51□□□□□ -0.25
MCF2L-229ENST00000488765 PDLIM3Q53GG5 364 aaPredicted RBP13.51□□□□□ -0.25
MCF2L-229ENST00000488765 CENPWQ5EE01 88 aa13.51□□□□□ -0.25
MCF2L-229ENST00000488765 DEFB125Q8N687 156 aa13.51□□□□□ -0.25
MCF2L-229ENST00000488765 NANOS1Q8WY41 292 aaKnown RBP13.51□□□□□ -0.25
MCF2L-229ENST00000488765 NABP1Q96AH0 204 aa13.51□□□□□ -0.25
MCF2L-229ENST00000488765 EAF1Q96JC9 268 aaPredicted RBP13.51□□□□□ -0.25
MCF2L-229ENST00000488765 LINC00479Q96M42 142 aa13.51□□□□□ -0.25
MCF2L-229ENST00000488765 IGLV2-14P01704 120 aa13.51□□□□□ -0.25
MCF2L-229ENST00000488765 CD1BP29016 333 aa13.51□□□□□ -0.25
MCF2L-229ENST00000488765 BOD1L1Q8NFC6 3051 aa13.51□□□□□ -0.25
MCF2L-229ENST00000488765 H0YJW9 148 aa13.51□□□□□ -0.25
MCF2L-229ENST00000488765 AZU1P20160 251 aa13.51□□□□□ -0.25
MCF2L-229ENST00000488765 MEF2CQ06413 473 aaPredicted RBP13.51□□□□□ -0.25
MCF2L-229ENST00000488765 ASCL4Q6XD76 172 aa13.51□□□□□ -0.25
MCF2L-229ENST00000488765 OR5B3Q8NH48 314 aa13.51□□□□□ -0.25
MCF2L-229ENST00000488765 GNB1LQ9BYB4 327 aa13.51□□□□□ -0.25
MCF2L-229ENST00000488765 IGHV3-13P01766 116 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 IGHV3-7P01780 117 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 MFAP2P55001 183 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 VWC2Q2TAL6 325 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 PNKDQ8N490 385 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 AP1S3Q96PC3 154 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 NPVFQ9HCQ7 196 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 SIT1Q9Y3P8 196 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 LSM4Q9Y4Z0 139 aaKnown RBP13.5□□□□□ -0.25
MCF2L-229ENST00000488765 KIR2DS1A0A191URI9 304 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 OR10J4P0C629 311 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 KIR2DS4P43632 304 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 GNG4P50150 75 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 KIR2DS1Q14954 304 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 TM4SF20Q53R12 229 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 SLC25A34Q6PIV7 304 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 OR4P4Q8NGL7 312 aa13.5□□□□□ -0.25
MCF2L-229ENST00000488765 DYSFO75923 2080 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 NEURL1O76050 574 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 PRB4P10163 310 aaPredicted RBP13.49□□□□□ -0.25
MCF2L-229ENST00000488765 OR8B8Q15620 311 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 DNAJC13O75165 2243 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 LOC102723996A0A087X1L8 192 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 IGLC1P0CG04 106 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 SRD5A2P31213 254 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 LTC4SQ16873 150 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 FAM71F2Q6NXP2 309 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 PERPQ96FX8 193 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 ABI3Q9P2A4 366 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 LAMA5O15230 3695 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 ARFGEF3Q5TH69 2177 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 CEACAM3P40198 252 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 VWA1Q6PCB0 445 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 TRAT1Q6PIZ9 186 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 C19orf35Q6ZS72 473 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 BHLHA15Q7RTS1 189 aaPredicted RBP13.49□□□□□ -0.25
MCF2L-229ENST00000488765 VKORC1L1Q8N0U8 176 aa13.49□□□□□ -0.25
MCF2L-229ENST00000488765 ZNF331Q9NQX6 463 aaPredicted RBP13.49□□□□□ -0.25
MCF2L-229ENST00000488765 COLQQ9Y215 455 aaPredicted RBP13.49□□□□□ -0.25
MCF2L-229ENST00000488765 IGKV3D-11A0A0A0MRZ8 115 aa13.48□□□□□ -0.25
MCF2L-229ENST00000488765 G3V4G9 280 aa13.48□□□□□ -0.25
MCF2L-229ENST00000488765 NTF4P34130 210 aa13.48□□□□□ -0.25
MCF2L-229ENST00000488765 RPL30P62888 115 aaKnown RBP13.48□□□□□ -0.25
MCF2L-229ENST00000488765 CFAP161Q6P656 301 aa13.48□□□□□ -0.25
MCF2L-229ENST00000488765 DRAM1Q8N682 238 aa13.48□□□□□ -0.25
MCF2L-229ENST00000488765 STRADBQ9C0K7 418 aa13.48□□□□□ -0.25
MCF2L-229ENST00000488765 ZNF355PQ9NSJ1 428 aa13.48□□□□□ -0.25
MCF2L-229ENST00000488765 HELTA6NFD8 242 aa13.48□□□□□ -0.25
MCF2L-229ENST00000488765 CX3CL1P78423 397 aa13.48□□□□□ -0.25
MCF2L-229ENST00000488765 OR10J3Q5JRS4 329 aa13.48□□□□□ -0.25
MCF2L-229ENST00000488765 SPACA3Q8IXA5 215 aa13.48□□□□□ -0.25
MCF2L-229ENST00000488765 MAFAQ8NHW3 353 aaPredicted RBP13.48□□□□□ -0.25
MCF2L-229ENST00000488765 FGF23Q9GZV9 251 aaPredicted RBP13.48□□□□□ -0.25
MCF2L-229ENST00000488765 TRAPPC2LQ9UL33 140 aa13.48□□□□□ -0.25
MCF2L-229ENST00000488765 EML6Q6ZMW3 1958 aa13.48□□□□□ -0.25
MCF2L-229ENST00000488765 DEFB108AA8MXU0 73 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 AHRRA9YTQ3 701 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 SF3B5Q9BWJ5 86 aaKnown RBP13.47□□□□□ -0.25
MCF2L-229ENST00000488765 A0A096LPE4 126 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 SPAARA0A1B0GVQ0 90 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 A0A1W2PPZ6 126 aa13.47□□□□□ -0.25
MCF2L-229ENST00000488765 LILRA5A6NI73 299 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms