RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 BRI3O95415 125 aa12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 LGALS1P09382 135 aaKnown RBP12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 OR9G9P0C7N8 305 aa12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 IGLL1P15814 213 aa12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 PTBP1P26599 531 aaKnown RBP eCLIP12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 CD40LGP29965 261 aa12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 ETV6P41212 452 aa12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 ERVK-16P61578 105 aa12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 DEFA5Q01523 94 aa12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 KLF9Q13886 244 aaPredicted RBP12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 BEAN1Q3B7T3 259 aa12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 OXLD1Q5BKU9 147 aa12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 Q8N402 240 aa12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 ZNF355PQ9NSJ1 428 aa12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 SLC2A8Q9NY64 477 aa12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 COA4Q9NYJ1 87 aa12.4□□□□□ -0.42
ERGIC3-216ENST00000488384 CGB1A6NKQ9 187 aa12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 H0Y980 276 aa12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 KRASP01116 189 aa12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 IGKV1-39P01597 117 aa12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 IGHV3-11P01762 117 aa12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 IGKV1D-39P04432 117 aa12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 CTSDP07339 412 aaPredicted RBP12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 FGF2P09038 288 aa12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 G6PCP35575 357 aa12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 OR2B8PP59922 312 aa12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 SPANXN2Q5MJ10 180 aa12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 KPRPQ5T749 579 aaPredicted RBP12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 OR11H1Q8NG94 326 aa12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 OR51S1Q8NGJ8 323 aa12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 ZFAND1Q8TCF1 268 aa12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 RCC1LQ96I51 464 aaKnown RBP12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 FYTTD1Q96QD9 318 aaKnown RBP12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 PRRT1Q99946 306 aa12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 SRRQ9GZT4 340 aa12.39□□□□□ -0.43
ERGIC3-216ENST00000488384 RBMXL2O75526 392 aaKnown RBP12.38□□□□□ -0.43
ERGIC3-216ENST00000488384 ECI1P42126 302 aa12.38□□□□□ -0.43
ERGIC3-216ENST00000488384 RAB25P57735 213 aa12.38□□□□□ -0.43
ERGIC3-216ENST00000488384 SURF2Q15527 256 aaPredicted RBP12.38□□□□□ -0.43
ERGIC3-216ENST00000488384 C19orf35Q6ZS72 473 aa12.38□□□□□ -0.43
ERGIC3-216ENST00000488384 CADM3Q8N126 398 aa12.38□□□□□ -0.43
ERGIC3-216ENST00000488384 TTC9CQ8N5M4 171 aa12.38□□□□□ -0.43
ERGIC3-216ENST00000488384 CCDC71LQ8N9Z2 235 aa12.38□□□□□ -0.43
ERGIC3-216ENST00000488384 OR1N2Q8NGR9 330 aa12.38□□□□□ -0.43
ERGIC3-216ENST00000488384 TP53RKQ96S44 253 aa12.38□□□□□ -0.43
ERGIC3-216ENST00000488384 C5orf66Q9H5L9 145 aa12.38□□□□□ -0.43
ERGIC3-216ENST00000488384 COPZ2Q9P299 210 aa12.38□□□□□ -0.43
ERGIC3-216ENST00000488384 NPIPB5A8MRT5 1133 aa12.37□□□□□ -0.43
ERGIC3-216ENST00000488384 PRH1P02810 166 aa12.37□□□□□ -0.43
ERGIC3-216ENST00000488384 AREGP15514 252 aa12.37□□□□□ -0.43
ERGIC3-216ENST00000488384 ZNF45Q02386 682 aa12.37□□□□□ -0.43
ERGIC3-216ENST00000488384 ZNF616Q08AN1 781 aa12.37□□□□□ -0.43
ERGIC3-216ENST00000488384 SEC22AQ96IW7 307 aa12.37□□□□□ -0.43
ERGIC3-216ENST00000488384 RTBDNQ9BSG5 229 aaPredicted RBP12.37□□□□□ -0.43
ERGIC3-216ENST00000488384 MCUBQ9NWR8 336 aa12.37□□□□□ -0.43
ERGIC3-216ENST00000488384 ZNF257Q9Y2Q1 563 aa12.37□□□□□ -0.43
ERGIC3-216ENST00000488384 IGHV4OR15-8A0A075B7B6 117 aa12.36□□□□□ -0.43
ERGIC3-216ENST00000488384 A0A087WW49 117 aa12.36□□□□□ -0.43
ERGIC3-216ENST00000488384 C3orf85A0A1B0GTC6 90 aa12.36□□□□□ -0.43
ERGIC3-216ENST00000488384 SERPINE2P07093 398 aa12.36□□□□□ -0.43
ERGIC3-216ENST00000488384 OR8U8P0C7N1 319 aa12.36□□□□□ -0.43
ERGIC3-216ENST00000488384 TOMM5Q8N4H5 51 aa12.36□□□□□ -0.43
ERGIC3-216ENST00000488384 COMMD5Q9GZQ3 224 aa12.36□□□□□ -0.43
ERGIC3-216ENST00000488384 SCP2D1Q9UJQ7 156 aa12.36□□□□□ -0.43
ERGIC3-216ENST00000488384 GPR132Q9UNW8 380 aa12.36□□□□□ -0.43
ERGIC3-216ENST00000488384 C14orf166Q9Y224 244 aaKnown RBP12.36□□□□□ -0.43
ERGIC3-216ENST00000488384 NSG2Q9Y328 171 aa12.36□□□□□ -0.43
ERGIC3-216ENST00000488384 TRBV9A0A0B4J1U6 114 aa12.35□□□□□ -0.43
ERGIC3-216ENST00000488384 A0A0G2JLM5 398 aa12.35□□□□□ -0.43
ERGIC3-216ENST00000488384 C13orf42A0A1B0GVH6 325 aa12.35□□□□□ -0.43
ERGIC3-216ENST00000488384 IGLC7A0M8Q6 106 aa12.35□□□□□ -0.43
ERGIC3-216ENST00000488384 DUS4LO95620 317 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-216ENST00000488384 CRYGCP07315 174 aa12.35□□□□□ -0.43
ERGIC3-216ENST00000488384 PSMB6P28072 239 aa12.35□□□□□ -0.43
ERGIC3-216ENST00000488384 AP3S2P59780 193 aa12.35□□□□□ -0.43
ERGIC3-216ENST00000488384 RHOGP84095 191 aa12.35□□□□□ -0.43
ERGIC3-216ENST00000488384 SLC25A42Q86VD7 318 aa12.35□□□□□ -0.43
ERGIC3-216ENST00000488384 QTRT1Q9BXR0 403 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-216ENST00000488384 AKIP1Q9NQ31 210 aa12.35□□□□□ -0.43
ERGIC3-216ENST00000488384 TEX50A0A1B0GTY4 177 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 FAM223BA6NKX1 122 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 DBX1A6NMT0 343 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 C15orf61A6NNL5 157 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 LINC01619G3V211 115 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 IGKV1-5P01602 117 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 REG1AP05451 166 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 P0C879 139 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 CTRB1P17538 263 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 UCP1P25874 307 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 FAUP35544 74 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 SLURP1P55000 103 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 SP6Q3SY56 376 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 CTRB2Q6GPI1 263 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 FAM223AQ8IWN6 122 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 GDPD1Q8N9F7 314 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 TMEM230Q96A57 120 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 USMG5Q96IX5 58 aa12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 SDHCQ99643 169 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 SRSF8Q9BRL6 282 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-216ENST00000488384 MCRIP2Q9BUT9 160 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms