RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 MRGPRG-AS1Q2M3A8 158 aa12.35□□□□□ -0.43
C9orf3-219ENST00000488186 NSUN5P1Q3KNT7 163 aa12.35□□□□□ -0.43
C9orf3-219ENST00000488186 TMEM268Q5VZI3 342 aa12.35□□□□□ -0.43
C9orf3-219ENST00000488186 OR5T1Q8NG75 326 aa12.35□□□□□ -0.43
C9orf3-219ENST00000488186 WIPF2Q8TF74 440 aaPredicted RBP12.35□□□□□ -0.43
C9orf3-219ENST00000488186 GLYATL2Q8WU03 294 aa12.35□□□□□ -0.43
C9orf3-219ENST00000488186 GALNT14Q96FL9 552 aa12.35□□□□□ -0.43
C9orf3-219ENST00000488186 SEC22AQ96IW7 307 aa12.35□□□□□ -0.43
C9orf3-219ENST00000488186 CITED2Q99967 270 aaPredicted RBP12.35□□□□□ -0.43
C9orf3-219ENST00000488186 PRNDQ9UKY0 176 aa12.35□□□□□ -0.43
C9orf3-219ENST00000488186 TSSC4Q9Y5U2 329 aaPredicted RBP12.35□□□□□ -0.43
C9orf3-219ENST00000488186 A0A1W2PRX2 142 aa12.34□□□□□ -0.43
C9orf3-219ENST00000488186 M0QZ24 198 aa12.34□□□□□ -0.43
C9orf3-219ENST00000488186 CDS2O95674 445 aa12.34□□□□□ -0.43
C9orf3-219ENST00000488186 APELAP0DMC3 54 aa12.34□□□□□ -0.43
C9orf3-219ENST00000488186 ASAH1Q13510 395 aa12.34□□□□□ -0.43
C9orf3-219ENST00000488186 SLC25A42Q86VD7 318 aa12.34□□□□□ -0.43
C9orf3-219ENST00000488186 CADM3Q8N126 398 aa12.34□□□□□ -0.43
C9orf3-219ENST00000488186 LGI3Q8N145 548 aa12.34□□□□□ -0.43
C9orf3-219ENST00000488186 MINDY2Q8NBR6 621 aa12.34□□□□□ -0.43
C9orf3-219ENST00000488186 OR5M8Q8NGP6 311 aa12.34□□□□□ -0.43
C9orf3-219ENST00000488186 RBPMSQ93062 196 aaKnown RBP12.34□□□□□ -0.43
C9orf3-219ENST00000488186 HINT2Q9BX68 163 aa12.34□□□□□ -0.43
C9orf3-219ENST00000488186 COA4Q9NYJ1 87 aa12.34□□□□□ -0.43
C9orf3-219ENST00000488186 FLVCR2Q9UPI3 526 aa12.34□□□□□ -0.43
C9orf3-219ENST00000488186 NSG2Q9Y328 171 aa12.34□□□□□ -0.43
C9orf3-219ENST00000488186 OR51B2Q9Y5P1 312 aa12.34□□□□□ -0.43
C9orf3-219ENST00000488186 IGHG4P01861 327 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 TCRBP04435 133 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 IL6RP08887 468 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-219ENST00000488186 OR9G9P0C7N8 305 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 PPIFP30405 207 aaKnown RBP12.33□□□□□ -0.44
C9orf3-219ENST00000488186 BTCP35070 178 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 UBE2MP61081 183 aaKnown RBP12.33□□□□□ -0.44
C9orf3-219ENST00000488186 SSBP2P81877 361 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-219ENST00000488186 CD83Q01151 205 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 TMEM187Q14656 261 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 C2orf68Q2NKX9 166 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 C4orf46Q504U0 113 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 C10orf55Q5SWW7 151 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 HIST2H2BDQ6DRA6 164 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 NDUFA11Q86Y39 141 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 SELENOHQ8IZQ5 122 aaKnown RBP12.33□□□□□ -0.44
C9orf3-219ENST00000488186 OR1L8Q8NGR8 309 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 ENKURQ8TC29 256 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 CASTOR1Q8WTX7 329 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 ZFP57Q9NU63 452 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 TRRAPQ9Y4A5 3859 aa12.33□□□□□ -0.44
C9orf3-219ENST00000488186 PLXNB1O43157 2135 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 WNK1Q9H4A3 2382 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 TEX50A0A1B0GTY4 177 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 HMX3A6NHT5 357 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 NUDT19A8MXV4 375 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 SFT2D2O95562 160 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 FGF2P09038 288 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 TRAPPC2P0DI81 140 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 TRAPPC2BP0DI82 140 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 MECP2P51608 486 aaKnown RBP12.32□□□□□ -0.44
C9orf3-219ENST00000488186 OR2B8PP59922 312 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 CFHR3Q02985 330 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 FAM219AQ8IW50 185 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 IL22RA2Q969J5 263 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 TMEM56Q96MV1 263 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 MS4A10Q96PG2 267 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 PDCD10Q9BUL8 212 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 QTRT1Q9BXR0 403 aaKnown RBP12.32□□□□□ -0.44
C9orf3-219ENST00000488186 C20orf85Q9H1P6 137 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 TBC1D24Q9ULP9 559 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 TMEM56-RWDD3S4R434 201 aa12.32□□□□□ -0.44
C9orf3-219ENST00000488186 TRAV6A0A075B6T7 132 aa12.31□□□□□ -0.44
C9orf3-219ENST00000488186 IGKV1-5P01602 117 aa12.31□□□□□ -0.44
C9orf3-219ENST00000488186 IGLV1-40P01703 118 aa12.31□□□□□ -0.44
C9orf3-219ENST00000488186 RPLP1P05386 114 aaKnown RBP12.31□□□□□ -0.44
C9orf3-219ENST00000488186 OR4E1P0C645 316 aa12.31□□□□□ -0.44
C9orf3-219ENST00000488186 MYOD1P15172 320 aa12.31□□□□□ -0.44
C9orf3-219ENST00000488186 ANXA7P20073 488 aaKnown RBP12.31□□□□□ -0.44
C9orf3-219ENST00000488186 SLC6A1P30531 599 aa12.31□□□□□ -0.44
C9orf3-219ENST00000488186 RAB9AP51151 201 aa12.31□□□□□ -0.44
C9orf3-219ENST00000488186 SUPT4H1P63272 117 aaKnown RBP12.31□□□□□ -0.44
C9orf3-219ENST00000488186 PPP1R1AQ13522 171 aa12.31□□□□□ -0.44
C9orf3-219ENST00000488186 TCTEX1D4Q5JR98 221 aa12.31□□□□□ -0.44
C9orf3-219ENST00000488186 PRR31Q5SQ13 230 aa12.31□□□□□ -0.44
C9orf3-219ENST00000488186 LCNL1Q6ZST4 164 aa12.31□□□□□ -0.44
C9orf3-219ENST00000488186 MRPL41Q8IXM3 137 aaKnown RBP12.31□□□□□ -0.44
C9orf3-219ENST00000488186 SLA2Q9H6Q3 261 aa12.31□□□□□ -0.44
C9orf3-219ENST00000488186 PRR13Q9NZ81 148 aa12.31□□□□□ -0.44
C9orf3-219ENST00000488186 MGAM2Q2M2H8 2515 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 C15orf61A6NNL5 157 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 DHFRP00374 187 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 IFNA17P01571 189 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 HLA-AP01891 365 aaKnown RBP12.3□□□□□ -0.44
C9orf3-219ENST00000488186 TRGV3P03979 118 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 H2AFB2P0C5Z0 115 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 DEFA4P12838 97 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 PSMB8P28062 276 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 TPPP2P59282 170 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 RPL23AP62750 156 aaKnown RBP12.3□□□□□ -0.44
C9orf3-219ENST00000488186 IFITM3Q01628 133 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 IZUMO4Q1ZYL8 232 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 THOC7Q6I9Y2 204 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms