RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 MRGPRG-AS1Q2M3A8 158 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 LHFPL4Q7Z7J7 247 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 MOB3BQ86TA1 216 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 THNSL2Q86YJ6 484 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 HSD17B11Q8NBQ5 300 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 OR5B3Q8NH48 314 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 RNF141Q8WVD5 230 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 CFHR4Q92496 578 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 TSNAXQ99598 290 aaKnown RBP7.6□□□□□ -1.19
SF3B1-211ENST00000487698 SH3BGRL3Q9H299 93 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 SULT1A2P50226 295 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 KRTAP10-9P60411 292 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 RPL8P62917 257 aaKnown RBP7.6□□□□□ -1.19
SF3B1-211ENST00000487698 MINOS1Q5TGZ0 78 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 TMEM170AQ8WVE7 144 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 PARD6GQ9BYG4 376 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-211ENST00000487698 HEYLQ9NQ87 328 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-211ENST00000487698 FKBP11Q9NYL4 201 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 MINOS1-NBL1R4GNA1 71 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 NAV2Q8IVL1 2488 aa7.59□□□□□ -1.19
SF3B1-211ENST00000487698 TEX50A0A1B0GTY4 177 aa7.59□□□□□ -1.19
SF3B1-211ENST00000487698 PRSS46E5RG02 174 aa7.59□□□□□ -1.19
SF3B1-211ENST00000487698 TIMM23O14925 209 aa7.59□□□□□ -1.19
SF3B1-211ENST00000487698 SCAF4O95104 1147 aaKnown RBP7.59□□□□□ -1.19
SF3B1-211ENST00000487698 VENTXO95231 258 aa7.59□□□□□ -1.19
SF3B1-211ENST00000487698 CRYGBP07316 175 aa7.59□□□□□ -1.19
SF3B1-211ENST00000487698 ATP6V0CP27449 155 aa7.59□□□□□ -1.19
SF3B1-211ENST00000487698 HOXA1P49639 335 aaPredicted RBP7.59□□□□□ -1.19
SF3B1-211ENST00000487698 VMA21Q3ZAQ7 101 aa7.59□□□□□ -1.19
SF3B1-211ENST00000487698 OR8G2PQ6IF36 304 aa7.59□□□□□ -1.19
SF3B1-211ENST00000487698 COMMD7Q86VX2 200 aa7.59□□□□□ -1.19
SF3B1-211ENST00000487698 CLCC1Q96S66 551 aa7.59□□□□□ -1.19
SF3B1-211ENST00000487698 REG4Q9BYZ8 158 aa7.59□□□□□ -1.19
SF3B1-211ENST00000487698 HIPK2Q9H2X6 1198 aa7.59□□□□□ -1.19
SF3B1-211ENST00000487698 CSMD2Q7Z408 3487 aa7.59□□□□□ -1.19
SF3B1-211ENST00000487698 APCP25054 2843 aa7.59□□□□□ -1.19
SF3B1-211ENST00000487698 OOSP1A8MZH6 123 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 SLC25A17O43808 307 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 CD1BP29016 333 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 UBE2E1P51965 193 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 PAX8Q06710 450 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 VWC2Q2TAL6 325 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 DYNAPQ8N1N2 210 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 LILRB2Q8N423 598 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 TEX45Q8NA69 505 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 PINX1Q96BK5 328 aaKnown RBP7.58□□□□□ -1.2
SF3B1-211ENST00000487698 GNPNAT1Q96EK6 184 aaPredicted RBP7.58□□□□□ -1.2
SF3B1-211ENST00000487698 SAT2Q96F10 170 aaPredicted RBP7.58□□□□□ -1.2
SF3B1-211ENST00000487698 AJUBAQ96IF1 538 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 RNF5Q99942 180 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 ZNF430Q9H8G1 570 aaPredicted RBP7.58□□□□□ -1.2
SF3B1-211ENST00000487698 LPAR2Q9HBW0 351 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 TPSG1Q9NRR2 321 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 NDUFA4L2Q9NRX3 87 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 HILPDAQ9Y5L2 63 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 MAP1AP78559 2803 aaPredicted RBP7.58□□□□□ -1.2
SF3B1-211ENST00000487698 A0A096LNT2 108 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 CGB1A6NKQ9 187 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 INS-IGF2F8WCM5 200 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 RRHO14718 337 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 IFNA10P01566 189 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 IFNA5P01569 189 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 SLC25A16P16260 332 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 S100A1P23297 94 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 CNTFRP26992 372 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 RPP30P78346 268 aaKnown RBP7.58□□□□□ -1.2
SF3B1-211ENST00000487698 RUNX1Q01196 453 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 PSG5Q15238 335 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 ATP6V1FQ16864 119 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 CLEC12BQ2HXU8 276 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 LRRC75BQ2VPJ9 315 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 BSXQ3C1V8 233 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 OR10P1Q8NGE3 313 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 PSMG3-AS1Q96PY0 264 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 TMEM147Q9BVK8 224 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 PLEKHA3Q9HB20 300 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 TBL2Q9Y4P3 447 aaKnown RBP7.58□□□□□ -1.2
SF3B1-211ENST00000487698 RFNGQ9Y644 331 aa7.58□□□□□ -1.2
SF3B1-211ENST00000487698 A0A1W2PRD5 423 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 A0A1W2PRF3 423 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 A0A1W2PRM7 423 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 MFSD2BA6NFX1 497 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 ZNF705EA8MWA4 302 aaPredicted RBP7.57□□□□□ -1.2
SF3B1-211ENST00000487698 OR8U8P0C7N1 319 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 MDKP21741 143 aaPredicted RBP7.57□□□□□ -1.2
SF3B1-211ENST00000487698 PJVKQ0ZLH3 352 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 SLC24A4Q8NFF2 622 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 OR1L8Q8NGR8 309 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 C17orf50Q8WW18 174 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 C1orf159Q96HA4 380 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 CITED4Q96RK1 184 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 COMMD5Q9GZQ3 224 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 WDR61Q9GZS3 305 aaKnown RBP7.57□□□□□ -1.2
SF3B1-211ENST00000487698 BEX4Q9NWD9 120 aaPredicted RBP7.57□□□□□ -1.2
SF3B1-211ENST00000487698 SIGLEC9Q9Y336 463 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 CR1P17927 2039 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 A0A1B0GW64 132 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 E7EUB6 86 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 OPN1MWP04001 364 aa7.57□□□□□ -1.2
SF3B1-211ENST00000487698 OPN1MW2P0DN77 364 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms