RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 DHRS2Q13268 280 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 DCTN2Q13561 401 aaKnown RBP10.47□□□□□ -0.73
COL4A6-207ENST00000487645 C4orf46Q504U0 113 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 C19orf54Q5BKX5 351 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 PLET1Q6UQ28 207 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 LYG2Q86SG7 212 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 COMMD1Q8N668 190 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 SRSF12Q8WXF0 261 aaKnown RBP10.47□□□□□ -0.73
COL4A6-207ENST00000487645 NOL4LQ96MY1 436 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-207ENST00000487645 SPIN2AQ99865 258 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 SPIN2BQ9BPZ2 258 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 MARVELD1Q9BSK0 173 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 ZNF747Q9BV97 191 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 TMEM14BQ9NUH8 114 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 SHPKQ9UHJ6 478 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 LINC00527Q9UJ94 153 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 PRNDQ9UKY0 176 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 TRAV41A0A0B4J266 112 aa10.46□□□□□ -0.73
COL4A6-207ENST00000487645 HLA-AP01891 365 aaKnown RBP10.46□□□□□ -0.73
COL4A6-207ENST00000487645 PPIFP30405 207 aaKnown RBP10.46□□□□□ -0.73
COL4A6-207ENST00000487645 RPL27AP46776 148 aaKnown RBP10.46□□□□□ -0.73
COL4A6-207ENST00000487645 ANKRD55Q3KP44 614 aa10.46□□□□□ -0.73
COL4A6-207ENST00000487645 C3orf56Q8N813 242 aa10.46□□□□□ -0.73
COL4A6-207ENST00000487645 MINDY2Q8NBR6 621 aa10.46□□□□□ -0.73
COL4A6-207ENST00000487645 OR5AU1Q8NGC0 362 aa10.46□□□□□ -0.73
COL4A6-207ENST00000487645 OR4A16Q8NH70 328 aa10.46□□□□□ -0.73
COL4A6-207ENST00000487645 COQ8AQ8NI60 647 aa10.46□□□□□ -0.73
COL4A6-207ENST00000487645 GRPEL2Q8TAA5 225 aa10.46□□□□□ -0.73
COL4A6-207ENST00000487645 ABHD5Q8WTS1 349 aa10.46□□□□□ -0.73
COL4A6-207ENST00000487645 CASTOR1Q8WTX7 329 aa10.46□□□□□ -0.73
COL4A6-207ENST00000487645 WFDC12Q8WWY7 111 aa10.46□□□□□ -0.73
COL4A6-207ENST00000487645 SRSF8Q9BRL6 282 aaKnown RBP10.46□□□□□ -0.73
COL4A6-207ENST00000487645 COMMD5Q9GZQ3 224 aa10.46□□□□□ -0.73
COL4A6-207ENST00000487645 FOXA2Q9Y261 457 aaPredicted RBP10.46□□□□□ -0.73
COL4A6-207ENST00000487645 FBXO7Q9Y3I1 522 aa10.46□□□□□ -0.73
COL4A6-207ENST00000487645 WSB1Q9Y6I7 421 aa10.46□□□□□ -0.73
COL4A6-207ENST00000487645 STAB1Q9NY15 2570 aa10.46□□□□□ -0.74
COL4A6-207ENST00000487645 A0A0B4J293 547 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 TEX50A0A1B0GTY4 177 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 C15orf61A6NNL5 157 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 G3V318 75 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 PTTG1O95997 202 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 IGHG4P01861 327 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 IL5P05113 134 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 OR2B8PP59922 312 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 CFHR3Q02985 330 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 THOC7Q6I9Y2 204 aaKnown RBP10.45□□□□□ -0.74
COL4A6-207ENST00000487645 TEX38Q6PEX7 206 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 UNQ5815/PRO19632Q6UWF5 114 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 LYZL2Q7Z4W2 148 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 ZNF429Q86V71 674 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 SLC35G3Q8N808 338 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 LFNGQ8NES3 379 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 OR1L8Q8NGR8 309 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 OR5B3Q8NH48 314 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 RNASE11Q8TAA1 199 aaKnown RBP10.45□□□□□ -0.74
COL4A6-207ENST00000487645 PHB2Q99623 299 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-207ENST00000487645 PRR13Q9NZ81 148 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 CACFD1Q9UGQ2 172 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 ZNF257Q9Y2Q1 563 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 OR51B2Q9Y5P1 312 aa10.45□□□□□ -0.74
COL4A6-207ENST00000487645 E7EUB6 86 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 INMT-MINDY4F8WBC2 141 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 PRAF2O60831 178 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 DHFRP00374 187 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 IGLV1-40P01703 118 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 TRAPPC2P0DI81 140 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 TRAPPC2BP0DI82 140 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 HSPE1P61604 102 aaKnown RBP10.44□□□□□ -0.74
COL4A6-207ENST00000487645 NMSQ5H8A3 153 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 ZNF329Q86UD4 541 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 OR5M8Q8NGP6 311 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 SPATA3Q8NHX4 192 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 ZNF431Q8TF32 576 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-207ENST00000487645 MITD1Q8WV92 249 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 GPR146Q96CH1 333 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 CITED1Q99966 193 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 FAM103A1Q9BTL3 118 aaKnown RBP10.44□□□□□ -0.74
COL4A6-207ENST00000487645 QTRT1Q9BXR0 403 aaKnown RBP10.44□□□□□ -0.74
COL4A6-207ENST00000487645 NDUFA4L2Q9NRX3 87 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 COA4Q9NYJ1 87 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 NSG2Q9Y328 171 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 TMED3Q9Y3Q3 217 aa10.44□□□□□ -0.74
COL4A6-207ENST00000487645 A0A0G2JRQ6 117 aa10.43□□□□□ -0.74
COL4A6-207ENST00000487645 A0A1B0GU03 582 aa10.43□□□□□ -0.74
COL4A6-207ENST00000487645 CGB1A6NKQ9 187 aa10.43□□□□□ -0.74
COL4A6-207ENST00000487645 TEX22C9J3V5 150 aa10.43□□□□□ -0.74
COL4A6-207ENST00000487645 RBMXL2O75526 392 aaKnown RBP10.43□□□□□ -0.74
COL4A6-207ENST00000487645 BRI3O95415 125 aa10.43□□□□□ -0.74
COL4A6-207ENST00000487645 ELANEP08246 267 aa10.43□□□□□ -0.74
COL4A6-207ENST00000487645 SLC25A6P12236 298 aa10.43□□□□□ -0.74
COL4A6-207ENST00000487645 KRTAP10-3P60369 221 aa10.43□□□□□ -0.74
COL4A6-207ENST00000487645 FOXE3Q13461 319 aa10.43□□□□□ -0.74
COL4A6-207ENST00000487645 ECSCRQ19T08 205 aa10.43□□□□□ -0.74
COL4A6-207ENST00000487645 IZUMO4Q1ZYL8 232 aa10.43□□□□□ -0.74
COL4A6-207ENST00000487645 AARDQ4LEZ3 155 aa10.43□□□□□ -0.74
COL4A6-207ENST00000487645 C10orf55Q5SWW7 151 aa10.43□□□□□ -0.74
COL4A6-207ENST00000487645 SHISA2Q6UWI4 295 aa10.43□□□□□ -0.74
COL4A6-207ENST00000487645 Q6ZRM9 215 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms