RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 RNASE6Q93091 150 aaKnown RBP11.29□□□□□ -0.6
HDLBP-241ENST00000487169 TMEM191AQ9H0A3 160 aa11.29□□□□□ -0.6
HDLBP-241ENST00000487169 FBXL15Q9H469 300 aa11.29□□□□□ -0.6
HDLBP-241ENST00000487169 IGHV3OR16-13A0A075B7E8 117 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 IGHV3-74A0A0B4J1X5 117 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 IGKV1-9A0A0C4DH69 117 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 IQCF6A8MYZ5 107 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 GALNT14Q96FL9 552 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 REG4Q9BYZ8 158 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 UCP1P25874 307 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 ELOBQ15370 118 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 TMEM183BQ1AE95 376 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 OSR1Q8TAX0 266 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-241ENST00000487169 SEMA5BQ9P283 1151 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 RPL7P18124 248 aaKnown RBP11.28□□□□□ -0.6
HDLBP-241ENST00000487169 LINC00469Q8N7U9 141 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 ZNF738Q8NE65 137 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 OR10J6PQ8NGY7 276 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 NABP2Q9BQ15 211 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 HSPB7Q9UBY9 170 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 LRRK1Q38SD2 2015 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 FANCMQ8IYD8 2048 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 TRAV30A0A087WSZ9 112 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 KBTBD11-OT1A0A1B0GTJ5 212 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 FHITP49789 147 aa11.28□□□□□ -0.6
HDLBP-241ENST00000487169 HSPB1P04792 205 aaKnown RBP11.27□□□□□ -0.6
HDLBP-241ENST00000487169 CDKN1AP38936 164 aa11.27□□□□□ -0.6
HDLBP-241ENST00000487169 WDFY1Q8IWB7 410 aa11.27□□□□□ -0.6
HDLBP-241ENST00000487169 GATAD1Q8WUU5 269 aa11.27□□□□□ -0.6
HDLBP-241ENST00000487169 SGK494Q96LW2 274 aa11.27□□□□□ -0.6
HDLBP-241ENST00000487169 RPRMQ9NS64 109 aa11.27□□□□□ -0.6
HDLBP-241ENST00000487169 SPRR3Q9UBC9 169 aa11.27□□□□□ -0.6
HDLBP-241ENST00000487169 C17orf98A8MV24 154 aa11.27□□□□□ -0.61
HDLBP-241ENST00000487169 SS18L1O75177 396 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-241ENST00000487169 CCL3L1P16619 93 aa11.27□□□□□ -0.61
HDLBP-241ENST00000487169 IGFBP3P17936 291 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-241ENST00000487169 PUSL1Q8N0Z8 303 aaKnown RBP11.27□□□□□ -0.61
HDLBP-241ENST00000487169 ZIC4Q8N9L1 334 aa11.27□□□□□ -0.61
HDLBP-241ENST00000487169 DOPEY1Q5JWR5 2465 aa11.27□□□□□ -0.61
HDLBP-241ENST00000487169 NCOR2Q9Y618 2525 aa11.27□□□□□ -0.61
HDLBP-241ENST00000487169 VWA8A3KMH1 1905 aa11.27□□□□□ -0.61
HDLBP-241ENST00000487169 SCGB1C2P0DMR2 95 aa11.27□□□□□ -0.61
HDLBP-241ENST00000487169 ZNF146Q15072 292 aa11.27□□□□□ -0.61
HDLBP-241ENST00000487169 IBA57Q5T440 356 aaKnown RBP11.27□□□□□ -0.61
HDLBP-241ENST00000487169 CENPVQ7Z7K6 275 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-241ENST00000487169 KLHDC3Q9BQ90 382 aa11.27□□□□□ -0.61
HDLBP-241ENST00000487169 MRPL37Q9BZE1 423 aaKnown RBP11.27□□□□□ -0.61
HDLBP-241ENST00000487169 TM4SF5O14894 197 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 SNCGO76070 127 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 Q6ZN92 141 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 OR10S1Q8NGN2 331 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 SSBP3Q9BWW4 388 aaPredicted RBP11.26□□□□□ -0.61
HDLBP-241ENST00000487169 SH3BGRL3Q9H299 93 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 PQLC2LA1A4F0 135 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 IL4P05112 153 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 RNF224P0DH78 156 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 RND3P61587 244 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 FOXF2Q12947 444 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 FGFBP3Q8TAT2 258 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 FAM168AQ92567 244 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 TGFAP01135 160 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 TMEM189A5PLL7 270 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 E9PLN8 166 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 CA2P00918 260 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 APCSP02743 223 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 ARL14EPLP0DKL9 152 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 NPPCP23582 126 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 CRYBB3P26998 211 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 ATP5IP56385 69 aaPredicted RBP11.26□□□□□ -0.61
HDLBP-241ENST00000487169 FAM3BP58499 235 aaPredicted RBP11.26□□□□□ -0.61
HDLBP-241ENST00000487169 DDB2Q92466 427 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 VKORC1Q9BQB6 163 aa11.26□□□□□ -0.61
HDLBP-241ENST00000487169 MSGN1A6NI15 193 aa11.25□□□□□ -0.61
HDLBP-241ENST00000487169 SMAD7O15105 426 aaKnown RBP11.25□□□□□ -0.61
HDLBP-241ENST00000487169 MOSP00540 346 aa11.25□□□□□ -0.61
HDLBP-241ENST00000487169 MEF2CQ06413 473 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-241ENST00000487169 OR51M1Q9H341 326 aa11.25□□□□□ -0.61
HDLBP-241ENST00000487169 C7orf69Q9H7B7 122 aa11.25□□□□□ -0.61
HDLBP-241ENST00000487169 PLSCR2Q9NRY7 297 aa11.25□□□□□ -0.61
HDLBP-241ENST00000487169 ELOA3CA0A087WX78 387 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-241ENST00000487169 LYNX1G3V0Z9 82 aa11.25□□□□□ -0.61
HDLBP-241ENST00000487169 J3QR89 54 aa11.25□□□□□ -0.61
HDLBP-241ENST00000487169 RRHO14718 337 aa11.25□□□□□ -0.61
HDLBP-241ENST00000487169 LYNX1P0DP58 116 aa11.25□□□□□ -0.61
HDLBP-241ENST00000487169 SCGB1D4Q6XE38 83 aa11.25□□□□□ -0.61
HDLBP-241ENST00000487169 PLPPR1Q8TBJ4 325 aa11.25□□□□□ -0.61
HDLBP-241ENST00000487169 PACRGQ96M98 296 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-241ENST00000487169 IGHV3OR16-12A0A075B7B8 117 aa11.24□□□□□ -0.61
HDLBP-241ENST00000487169 IGKV3D-15A0A087WSY6 115 aa11.24□□□□□ -0.61
HDLBP-241ENST00000487169 ATP5G2Q06055 141 aa11.24□□□□□ -0.61
HDLBP-241ENST00000487169 GSX1Q9H4S2 264 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-241ENST00000487169 CD8AP01732 235 aa11.24□□□□□ -0.61
HDLBP-241ENST00000487169 MAS1LP35410 378 aa11.24□□□□□ -0.61
HDLBP-241ENST00000487169 LINC00312Q9Y6C7 94 aa11.24□□□□□ -0.61
HDLBP-241ENST00000487169 IGHV3-49A0A0A0MS15 119 aa11.24□□□□□ -0.61
HDLBP-241ENST00000487169 MPTX1A8MV57 137 aa11.24□□□□□ -0.61
HDLBP-241ENST00000487169 EFNB1P98172 346 aa11.24□□□□□ -0.61
HDLBP-241ENST00000487169 C2orf68Q2NKX9 166 aa11.24□□□□□ -0.61
HDLBP-241ENST00000487169 GGNQ86UU5 652 aa11.24□□□□□ -0.61
HDLBP-241ENST00000487169 S4R3C0 116 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms