RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 ABCB9Q9NP78 766 aa2.65□□□□□ -1.99
PRPF38A-203ENST00000487160 C1orf109Q9NX04 203 aa2.65□□□□□ -1.99
PRPF38A-203ENST00000487160 UBAP1Q9NZ09 502 aa2.65□□□□□ -1.99
PRPF38A-203ENST00000487160 CHCHD2Q9Y6H1 151 aaPredicted RBP2.65□□□□□ -1.99
PRPF38A-203ENST00000487160 RYR3Q15413 4870 aa2.65□□□□□ -1.99
PRPF38A-203ENST00000487160 IGKV1D-17A0A075B6S4 117 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 LOC389332A0A1B0GUA5 103 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 OR2AT4A6NND4 320 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 IGHV1-46P01743 117 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 C1QAP02745 245 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 IFNA16P05015 189 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 OR5AC1P0C628 307 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 LIMS3P0CW19 117 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 LIMS4P0CW20 117 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 SLC25A16P16260 332 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 M6PRP20645 277 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 IMPA1P29218 277 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 TTPAP49638 278 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 CDK9P50750 372 aaKnown RBP2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 SLC18A1P54219 525 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 PLTPP55058 493 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 MEF2CQ06413 473 aaPredicted RBP2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 FLOT2Q14254 428 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 ZNHIT3Q15649 155 aaPredicted RBP2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 ACSBG2Q5FVE4 666 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 FAM104BQ5XKR9 115 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 NIPAL1Q6NVV3 410 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 LYPD1Q8N2G4 141 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 ZDHHC22Q8N966 263 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 ACTL9Q8TC94 416 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 CCL17Q92583 94 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 SEC22CQ9BRL7 303 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 PRTFDC1Q9NRG1 225 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 SDHAF3Q9NRP4 125 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 MMACHCQ9Y4U1 282 aa2.64□□□□□ -1.99
PRPF38A-203ENST00000487160 HEATR1Q9H583 2144 aaKnown RBP2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 ARFGEF3Q5TH69 2177 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 ALPK2Q86TB3 2170 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 hCG_1818297A0A087WSY0 165 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 RBFOX3A6NFN3 312 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 C9JQL5 133 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 APOC4-APOC2K7ER74 178 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 CXorf1O96002 111 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 NRASP01111 189 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 HRASP01112 189 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 KRASP01116 189 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 APOC2P02655 101 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 SNRPAP09012 282 aaKnown RBP2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 RPS3P23396 243 aaKnown RBP eCLIP2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 MARCKSL1P49006 195 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 TRIP13Q15645 432 aaPredicted RBP2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 SSX1Q16384 188 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 ZNF404Q494X3 552 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 SCIMPQ6UWF3 145 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 SBSNQ6UWP8 590 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 MORN4Q8NDC4 146 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 ZNF555Q8NEP9 628 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 OR1P1Q8NH06 330 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 DYNC2LI1Q8TCX1 351 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 ZNF721Q8TF20 911 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 BLNKQ8WV28 456 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 PPP1R2P1Q96PQ5 205 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 AICDAQ9GZX7 198 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 METTL8Q9H825 291 aaKnown RBP2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 TMEM38BQ9NVV0 291 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 RBM12B-AS1Q9P1G2 102 aa2.63□□□□□ -1.99
PRPF38A-203ENST00000487160 CADP27708 2225 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 IZUMO1RA6ND01 250 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 E5RI56 91 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 FFAR1O14842 300 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 LY6HO94772 140 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 CDK1P06493 297 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 CRHP06850 196 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 ZNF708P17019 499 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 HLA-DMAP28067 261 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 RPL22P35268 128 aaKnown RBP2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 SRP14P37108 136 aaKnown RBP2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 ANP32AP39687 249 aaKnown RBP2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 BTN3A2P78410 334 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 MYL5Q02045 173 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 BNIP2Q12982 314 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 ATP6AP1LQ52LC2 224 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 ACTBL2Q562R1 376 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 CDKL4Q5MAI5 379 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 CLEC12AQ5QGZ9 265 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 TMEM69Q5SWH9 247 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 NCMAPQ5T1S8 102 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 AGTRAPQ6RW13 159 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 DGAT2L6Q6ZPD8 337 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 PLEKHG7Q6ZR37 379 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 TMEM136Q6ZRR5 245 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 SSX7Q7RTT5 188 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 LINC00596Q86U02 117 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 FUNDC1Q8IVP5 155 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 OR8K1Q8NGG5 319 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 OR5H2Q8NGV7 314 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 C10orf105Q8TEF2 133 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 IFT81Q8WYA0 676 aa2.62□□□□□ -1.99
PRPF38A-203ENST00000487160 FMC1Q96HJ9 113 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms