RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 MPC1Q9Y5U8 109 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 CFAP46Q8IYW2 2715 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 COL6A6A6NMZ7 2263 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 PCNX1Q96RV3 2341 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 ESPL1Q14674 2120 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 HEATR1Q9H583 2144 aaKnown RBP2.84□□□□□ -1.95
PTCD3-216ENST00000487043 EPG5Q9HCE0 2579 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 KALRNO60229 2985 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 IGLV3-9A0A075B6K5 115 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 IGKV1-27A0A075B6S5 117 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 PQLC2LA1A4F0 135 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 FABP12A6NFH5 140 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF850A8MQ14 1090 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 CENPXA8MT69 81 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 IQCF6A8MYZ5 107 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 ATP6V1G2-DDX39BF2Z307 99 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 HPGDSO60760 199 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 PRB1P04280 392 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 UBBP0CG47 229 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 MGMTP16455 207 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 ELK1P19419 428 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 FUT3P21217 361 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 TALDO1P37837 337 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 MPV17P39210 176 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 RBP2P50120 134 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 FABP6P51161 128 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 RPS23P62266 143 aaKnown RBP2.84□□□□□ -1.95
PTCD3-216ENST00000487043 RAB11AP62491 216 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 QRFPP83859 136 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 TFF3Q07654 80 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 PRDX4Q13162 271 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 MAB21L1Q13394 359 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 RAB11BQ15907 218 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 CEACAM21Q3KPI0 293 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 SMUG1Q53HV7 270 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 NCMAPQ5T1S8 102 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 CASC10Q5T4H9 136 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 OR2T2Q6IF00 324 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 GLIPR1L1Q6UWM5 242 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 OR2W3Q7Z3T1 314 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 LRRC28Q86X40 367 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-216ENST00000487043 SLC7A5P1Q8MH63 180 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 LYG1Q8N1E2 194 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 JAGN1Q8N5M9 183 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 C20orf203Q8NBC4 194 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 PXT1Q8NFP0 134 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 OR8G5Q8NG78 346 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 OR5A2Q8NGI9 324 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 OR4D6Q8NGJ1 314 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 OR9G4Q8NGQ1 327 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 SYNPRQ8TBG9 265 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 ITLN2Q8WWU7 325 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-216ENST00000487043 OR5P3Q8WZ94 311 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 CPNE2Q96FN4 548 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-216ENST00000487043 RNF170Q96K19 258 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 GPER1Q99527 375 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 ACTR3CQ9C0K3 210 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-216ENST00000487043 SLC22A4Q9H015 551 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 OR51B6Q9H340 312 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 TMEM100Q9NV29 134 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 MTCH1Q9NZJ7 389 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 RAB22AQ9UL26 194 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 NOP16Q9Y3C1 178 aaKnown RBP2.84□□□□□ -1.95
PTCD3-216ENST00000487043 V9GYH0 126 aa2.84□□□□□ -1.95
PTCD3-216ENST00000487043 NBASA2RRP1 2371 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 PRR14LQ5THK1 2151 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 KMT2BQ9UMN6 2715 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-216ENST00000487043 A0A0A6YYH2 397 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 A6NJ64 397 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 TMEM14DPA8MWL7 114 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 J3QRK9 145 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 SNAPC5O75971 98 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 CRYZL1O95825 349 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 LY6G6DO95868 133 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 PTTG1O95997 202 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 HLA-DQB1P01920 261 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 EIF4EP06730 217 aaKnown RBP2.83□□□□□ -1.96
PTCD3-216ENST00000487043 TRAPPC2P0DI81 140 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 TRAPPC2BP0DI82 140 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 KLF3P57682 345 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-216ENST00000487043 NUTF2P61970 127 aaKnown RBP2.83□□□□□ -1.96
PTCD3-216ENST00000487043 GNG3P63215 75 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 PITPNAQ00169 270 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 IFITM3Q01628 133 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 BSPH1Q075Z2 132 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 UNC119Q13432 240 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 GPR176Q14439 515 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 ZNF79Q15937 498 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 LRRC10Q5BKY1 277 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 BEX5Q5H9J7 111 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 TMEM255AQ5JRV8 349 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 UBE2NLQ5JXB2 153 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 C6orf183Q5T699 404 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 RSBN1Q5VWQ0 802 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-216ENST00000487043 OR10K2Q6IF99 312 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 FAM131AQ6UXB0 335 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 IL34Q6ZMJ4 242 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 IDO2Q6ZQW0 420 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 Q6ZR03 302 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 LRP11Q86VZ4 500 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms