RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 RNASE10Q5GAN6 216 aaKnown RBP12.25□□□□□ -0.45
HDAC8-218ENST00000486704 FAM209BQ5JX69 171 aa12.25□□□□□ -0.45
HDAC8-218ENST00000486704 DMBX1Q8NFW5 382 aa12.25□□□□□ -0.45
HDAC8-218ENST00000486704 SRSF8Q9BRL6 282 aaKnown RBP12.25□□□□□ -0.45
HDAC8-218ENST00000486704 RABL2AQ9UBK7 228 aaPredicted RBP12.25□□□□□ -0.45
HDAC8-218ENST00000486704 PEF1Q9UBV8 284 aaKnown RBP12.25□□□□□ -0.45
HDAC8-218ENST00000486704 RABL2BQ9UNT1 228 aa12.25□□□□□ -0.45
HDAC8-218ENST00000486704 ZNF256Q9Y2P7 627 aaPredicted RBP12.25□□□□□ -0.45
HDAC8-218ENST00000486704 COL7A1Q02388 2944 aa12.25□□□□□ -0.45
HDAC8-218ENST00000486704 DPPA5A6NC42 116 aa12.24□□□□□ -0.45
HDAC8-218ENST00000486704 CGB1A6NKQ9 187 aa12.24□□□□□ -0.45
HDAC8-218ENST00000486704 H3BMQ9 156 aa12.24□□□□□ -0.45
HDAC8-218ENST00000486704 GABARAPH6UMI1 98 aa12.24□□□□□ -0.45
HDAC8-218ENST00000486704 M0QYG6 137 aa12.24□□□□□ -0.45
HDAC8-218ENST00000486704 CTDSP2O14595 271 aa12.24□□□□□ -0.45
HDAC8-218ENST00000486704 SAP30O75446 220 aa12.24□□□□□ -0.45
HDAC8-218ENST00000486704 PRH1P02810 166 aa12.24□□□□□ -0.45
HDAC8-218ENST00000486704 ECI1P42126 302 aa12.24□□□□□ -0.45
HDAC8-218ENST00000486704 OR2B8PP59922 312 aa12.24□□□□□ -0.45
HDAC8-218ENST00000486704 EXOSC2Q13868 293 aaKnown RBP12.24□□□□□ -0.45
HDAC8-218ENST00000486704 KLF5Q13887 457 aaPredicted RBP12.24□□□□□ -0.45
HDAC8-218ENST00000486704 ZNF585BQ52M93 769 aa12.24□□□□□ -0.45
HDAC8-218ENST00000486704 RNASE12Q5GAN4 147 aaKnown RBP12.24□□□□□ -0.45
HDAC8-218ENST00000486704 THOC7Q6I9Y2 204 aaKnown RBP12.24□□□□□ -0.45
HDAC8-218ENST00000486704 LHFPL1Q86WI0 220 aa12.24□□□□□ -0.45
HDAC8-218ENST00000486704 FCAMRQ8WWV6 532 aa12.24□□□□□ -0.45
HDAC8-218ENST00000486704 ISOC1Q96CN7 298 aa12.24□□□□□ -0.45
HDAC8-218ENST00000486704 FYTTD1Q96QD9 318 aaKnown RBP12.24□□□□□ -0.45
HDAC8-218ENST00000486704 TRAV3A0A0B4J244 114 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 ANKRD34BA5PLL1 514 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 DHFRP00374 187 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 CD74P04233 296 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 CD3DP04234 171 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 IFNA6P05013 189 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 AREGP15514 252 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 CTRB1P17538 263 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 PTBP1P26599 531 aaKnown RBP eCLIP12.23□□□□□ -0.45
HDAC8-218ENST00000486704 PSMB6P28072 239 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 TAS2R19P59542 299 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 ATP5G2Q06055 141 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 PHLDA2Q53GA4 152 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 CTRB2Q6GPI1 263 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 TMEM229BQ8NBD8 167 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 SMIM4Q8WVI0 70 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 ZNF486Q96H40 463 aaPredicted RBP12.23□□□□□ -0.45
HDAC8-218ENST00000486704 COMMD5Q9GZQ3 224 aa12.23□□□□□ -0.45
HDAC8-218ENST00000486704 SLIRPQ9GZT3 109 aaKnown RBP12.23□□□□□ -0.45
HDAC8-218ENST00000486704 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.22□□□□□ -0.45
HDAC8-218ENST00000486704 IGLC7A0M8Q6 106 aa12.22□□□□□ -0.45
HDAC8-218ENST00000486704 CTDSPLO15194 276 aa12.22□□□□□ -0.45
HDAC8-218ENST00000486704 TRBV12-3P01733 135 aa12.22□□□□□ -0.45
HDAC8-218ENST00000486704 MYOD1P15172 320 aa12.22□□□□□ -0.45
HDAC8-218ENST00000486704 LPAR6P43657 344 aa12.22□□□□□ -0.45
HDAC8-218ENST00000486704 RND3P61587 244 aa12.22□□□□□ -0.45
HDAC8-218ENST00000486704 C15orf32Q32M92 178 aa12.22□□□□□ -0.45
HDAC8-218ENST00000486704 TBC1D26Q86UD7 250 aa12.22□□□□□ -0.45
HDAC8-218ENST00000486704 OR6Q1Q8NGQ2 317 aa12.22□□□□□ -0.45
HDAC8-218ENST00000486704 FANCD2OSQ96PS1 177 aa12.22□□□□□ -0.45
HDAC8-218ENST00000486704 PRR25Q96S07 402 aa12.22□□□□□ -0.45
HDAC8-218ENST00000486704 ELOVL1Q9BW60 279 aa12.22□□□□□ -0.45
HDAC8-218ENST00000486704 QTRT1Q9BXR0 403 aaKnown RBP12.22□□□□□ -0.45
HDAC8-218ENST00000486704 LSM4Q9Y4Z0 139 aaKnown RBP12.22□□□□□ -0.45
HDAC8-218ENST00000486704 OR2J3O76001 311 aa12.21□□□□□ -0.45
HDAC8-218ENST00000486704 HIST1H1BP16401 226 aaKnown RBP12.21□□□□□ -0.45
HDAC8-218ENST00000486704 RPEL1Q2QD12 228 aa12.21□□□□□ -0.45
HDAC8-218ENST00000486704 DEFB121Q5J5C9 76 aa12.21□□□□□ -0.45
HDAC8-218ENST00000486704 HSD17B13Q7Z5P4 300 aaPredicted RBP12.21□□□□□ -0.45
HDAC8-218ENST00000486704 OR9G4Q8NGQ1 327 aa12.21□□□□□ -0.45
HDAC8-218ENST00000486704 DIRAS2Q96HU8 199 aa12.21□□□□□ -0.45
HDAC8-218ENST00000486704 OR4C12Q96R67 309 aa12.21□□□□□ -0.45
HDAC8-218ENST00000486704 B9D2Q9BPU9 175 aa12.21□□□□□ -0.45
HDAC8-218ENST00000486704 IGLV11-55A0A075B6I3 123 aa12.2□□□□□ -0.46
HDAC8-218ENST00000486704 BMPR1BO00238 502 aa12.2□□□□□ -0.46
HDAC8-218ENST00000486704 KRASP01116 189 aa12.2□□□□□ -0.46
HDAC8-218ENST00000486704 G6PCP35575 357 aa12.2□□□□□ -0.46
HDAC8-218ENST00000486704 STEAP1BQ6NZ63 245 aa12.2□□□□□ -0.46
HDAC8-218ENST00000486704 C19orf35Q6ZS72 473 aa12.2□□□□□ -0.46
HDAC8-218ENST00000486704 OR4D10Q8NGI6 311 aa12.2□□□□□ -0.46
HDAC8-218ENST00000486704 OR1L8Q8NGR8 309 aa12.2□□□□□ -0.46
HDAC8-218ENST00000486704 TSC22D3Q99576 134 aa12.2□□□□□ -0.46
HDAC8-218ENST00000486704 C6orf62Q9GZU0 229 aaPredicted RBP12.2□□□□□ -0.46
HDAC8-218ENST00000486704 NXF2Q9GZY0 626 aaKnown RBP12.2□□□□□ -0.46
HDAC8-218ENST00000486704 FBXL7Q9UJT9 491 aa12.2□□□□□ -0.46
HDAC8-218ENST00000486704 CEPT1Q9Y6K0 416 aa12.2□□□□□ -0.46
HDAC8-218ENST00000486704 RAB3DO95716 219 aa12.19□□□□□ -0.46
HDAC8-218ENST00000486704 IGLV1-51P01701 117 aa12.19□□□□□ -0.46
HDAC8-218ENST00000486704 PGAM2P15259 253 aa12.19□□□□□ -0.46
HDAC8-218ENST00000486704 RPA2P15927 270 aa12.19□□□□□ -0.46
HDAC8-218ENST00000486704 SYNJ2BPP57105 145 aa12.19□□□□□ -0.46
HDAC8-218ENST00000486704 IL18Q14116 193 aa12.19□□□□□ -0.46
HDAC8-218ENST00000486704 MEF2DQ14814 521 aa12.19□□□□□ -0.46
HDAC8-218ENST00000486704 TERB2Q8NHR7 220 aa12.19□□□□□ -0.46
HDAC8-218ENST00000486704 SEC22AQ96IW7 307 aa12.19□□□□□ -0.46
HDAC8-218ENST00000486704 NDUFA4L2Q9NRX3 87 aa12.19□□□□□ -0.46
HDAC8-218ENST00000486704 TMEM14BQ9NUH8 114 aa12.19□□□□□ -0.46
HDAC8-218ENST00000486704 SIGLEC8Q9NYZ4 499 aa12.19□□□□□ -0.46
HDAC8-218ENST00000486704 PRNDQ9UKY0 176 aa12.19□□□□□ -0.46
HDAC8-218ENST00000486704 DMRT1Q9Y5R6 373 aa12.19□□□□□ -0.46
HDAC8-218ENST00000486704 TEX50A0A1B0GTY4 177 aa12.18□□□□□ -0.46
HDAC8-218ENST00000486704 C15orf61A6NNL5 157 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms