RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 OR2B11Q5JQS5 317 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 CXorf66Q5JRM2 361 aaPredicted RBP4.4□□□□□ -1.71
CUX1-208ENST00000485792 FAAP20Q6NZ36 180 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 ZNF343Q6P1L6 599 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 MMD2Q8IY49 270 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 VKORC1L1Q8N0U8 176 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 ARRDC1Q8N5I2 433 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 TMEM229BQ8NBD8 167 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 ADAD2Q8NCV1 583 aaKnown RBP4.4□□□□□ -1.71
CUX1-208ENST00000485792 KLHL30-AS1Q8NEE0 82 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 OR6F1Q8NGZ6 308 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 OR4S2Q8NH73 311 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 OR4A5Q8NH83 315 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 CD300LFQ8TDQ1 290 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 SECTM1Q8WVN6 248 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 SRSF12Q8WXF0 261 aaKnown RBP4.4□□□□□ -1.71
CUX1-208ENST00000485792 ARPC1AQ92747 370 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 BORCS5Q969J3 196 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 DGCR14Q96DF8 476 aaKnown RBP4.4□□□□□ -1.71
CUX1-208ENST00000485792 ZNF486Q96H40 463 aaPredicted RBP4.4□□□□□ -1.71
CUX1-208ENST00000485792 OR2A7Q96R45 310 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 ZNF2Q9BSG1 426 aaPredicted RBP4.4□□□□□ -1.71
CUX1-208ENST00000485792 TINAGL1Q9GZM7 467 aaPredicted RBP4.4□□□□□ -1.71
CUX1-208ENST00000485792 EHFQ9NZC4 300 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 EXTL2Q9UBQ6 330 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 SCOCQ9UIL1 159 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 VSIG4Q9Y279 399 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 PRELID3BQ9Y3B1 194 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 WSB1Q9Y6I7 421 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 MSGN1A6NI15 193 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 NPIPB5A8MRT5 1133 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 GPR31O00270 319 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 UPK2O00526 184 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 HRASP01112 189 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 PMP2P02689 132 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 CD3DP04234 171 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 LGALS1P09382 135 aaKnown RBP4.39□□□□□ -1.71
CUX1-208ENST00000485792 IGLL1P15814 213 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 NQO2P16083 231 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 CTRB1P17538 263 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 HLA-DMAP28067 261 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 TNFSF8P32971 234 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 OR2B8PP59922 312 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 DGCR2P98153 550 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 ZNF79Q15937 498 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 VMA21Q3ZAQ7 101 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 AARDQ4LEZ3 155 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 PVRIGQ6DKI7 326 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 CTRB2Q6GPI1 263 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 OR4A47Q6IF82 309 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 LPCAT3Q6P1A2 487 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 UNQ5815/PRO19632Q6UWF5 114 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 CCDC190Q86UF4 302 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 SNX29P2Q8IUI4 249 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 SPAG16Q8N0X2 631 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 POC5Q8NA72 575 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 OR11H1Q8NG94 326 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 OR5H2Q8NGV7 314 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 TERB2Q8NHR7 220 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 VSTM2AQ8TAG5 236 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 TRIM63Q969Q1 353 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 SEC22AQ96IW7 307 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 SDHCQ99643 169 aaPredicted RBP4.39□□□□□ -1.71
CUX1-208ENST00000485792 SRSF8Q9BRL6 282 aaKnown RBP4.39□□□□□ -1.71
CUX1-208ENST00000485792 AIFM2Q9BRQ8 373 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 SLC5A7Q9GZV3 580 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 IFT46Q9NQC8 304 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 PARP11Q9NR21 331 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 SLC2A9Q9NRM0 540 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 SLC2A8Q9NY64 477 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 TAS2R8Q9NYW2 309 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 COMMD9Q9P000 198 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 MRPS7Q9Y2R9 242 aaKnown RBP4.39□□□□□ -1.71
CUX1-208ENST00000485792 RBM7Q9Y580 266 aaKnown RBP4.39□□□□□ -1.71
CUX1-208ENST00000485792 V9GYH0 126 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 NBEAL2Q6ZNJ1 2754 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 AGRNO00468 2067 aa4.39□□□□□ -1.71
CUX1-208ENST00000485792 A0A0G2JRQ6 117 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 A0A1W2PN81 502 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 IGLC7A0M8Q6 106 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 ANKRD20A5PA0PJZ0 165 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 MARCH11A6NNE9 402 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 INS-IGF2F8WCM5 200 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 TNFSF12O43508 249 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 OR9G9P0C7N8 305 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 APELAP0DMC3 54 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 PF4V1P10720 104 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 CHRNA7P36544 502 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 MFAP2P55001 183 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 RPL8P62917 257 aaKnown RBP4.38□□□□□ -1.71
CUX1-208ENST00000485792 ZNF616Q08AN1 781 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 CATR1Q13166 79 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 CBX3Q13185 183 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 KLF5Q13887 457 aaPredicted RBP4.38□□□□□ -1.71
CUX1-208ENST00000485792 SURF2Q15527 256 aaPredicted RBP4.38□□□□□ -1.71
CUX1-208ENST00000485792 ACSM6Q6P461 480 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 IL34Q6ZMJ4 242 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 ADAMTSL5Q6ZMM2 481 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 HAPLN4Q86UW8 402 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 SLC38A6Q8IZM9 456 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms