RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 ZNF57Q68EA5 555 aaPredicted RBP3.57□□□□□ -1.84
RTN4-213ENST00000485749 CLEC19AQ6UXS0 136 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 ZNF705AQ6ZN79 300 aaPredicted RBP3.57□□□□□ -1.84
RTN4-213ENST00000485749 C11orf53Q8IXP5 236 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 EXOC3-AS1Q8N2X6 119 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 OR10D4PQ8NGN7 298 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 APOBEC4Q8WW27 367 aaKnown RBP3.57□□□□□ -1.84
RTN4-213ENST00000485749 OR4C12Q96R67 309 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 ZNF300Q96RE9 604 aaPredicted RBP3.57□□□□□ -1.84
RTN4-213ENST00000485749 SFXN3Q9BWM7 321 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 MRPL20Q9BYC9 149 aaKnown RBP3.57□□□□□ -1.84
RTN4-213ENST00000485749 EDA2RQ9HAV5 297 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 SMCO4Q9NRQ5 59 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 BET1LQ9NYM9 111 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 CCDC167Q9P0B6 97 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 MARCOQ9UEW3 520 aaPredicted RBP3.57□□□□□ -1.84
RTN4-213ENST00000485749 NOP16Q9Y3C1 178 aaKnown RBP3.57□□□□□ -1.84
RTN4-213ENST00000485749 BAZ2AQ9UIF9 1905 aaKnown RBP3.56□□□□□ -1.84
RTN4-213ENST00000485749 ARID2Q68CP9 1835 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 COL24A1Q17RW2 1714 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 TRBV19A0A075B6N1 114 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 IGHV4OR15-8A0A075B7B6 117 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 IGHV1OR21-1A0A087WYE8 117 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 TRAV8-1A0A0A6YYK1 113 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 SPAARA0A1B0GVQ0 90 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 C5orf63A6NC05 138 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 PGPA6NDG6 321 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 J3QRK9 145 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 PDCD5O14737 125 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 SS18L1O75177 396 aaPredicted RBP3.56□□□□□ -1.84
RTN4-213ENST00000485749 ZNF432O94892 652 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 NCR2O95944 276 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 PMP2P02689 132 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 LINC00694P0DN24 101 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 IGHV4-38-2P0DP08 117 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 MFAP2P55001 183 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 DYNLT1P63172 113 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 LOXL1Q08397 574 aaPredicted RBP3.56□□□□□ -1.84
RTN4-213ENST00000485749 SLC38A11Q08AI6 406 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 DAZ2Q13117 558 aaKnown RBP3.56□□□□□ -1.84
RTN4-213ENST00000485749 TGIF1Q15583 401 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 LCN8Q6JVE9 175 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 ATP5L2Q7Z4Y8 100 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 DAZ4Q86SG3 579 aaKnown RBP3.56□□□□□ -1.84
RTN4-213ENST00000485749 C9orf40Q8IXQ3 194 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 ZNF664Q8N3J9 261 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 METTL27Q8N6F8 245 aaPredicted RBP3.56□□□□□ -1.84
RTN4-213ENST00000485749 TEX29Q8N6K0 151 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 ZNF441Q8N8Z8 693 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 ZFP62Q8NB50 900 aaPredicted RBP3.56□□□□□ -1.84
RTN4-213ENST00000485749 LY6G5BQ8NDX9 201 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 OR4C16Q8NGL9 310 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 FNDC9Q8TBE3 224 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 SLC25A40Q8TBP6 338 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 RXFP4Q8TDU9 374 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 FRZBQ92765 325 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 KLK6Q92876 244 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 ZNF501Q96CX3 271 aaPredicted RBP3.56□□□□□ -1.84
RTN4-213ENST00000485749 WBP1Q96G27 269 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 PGLYRP4Q96LB8 373 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 C2orf48Q96LS8 159 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 MIEN1Q9BRT3 115 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 PAXXQ9BUH6 204 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 GGTLC1Q9BX51 225 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 TMEM191AQ9H0A3 160 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 DAZ1Q9NQZ3 744 aaKnown RBP3.56□□□□□ -1.84
RTN4-213ENST00000485749 DAZ3Q9NR90 486 aaKnown RBP3.56□□□□□ -1.84
RTN4-213ENST00000485749 CBLN4Q9NTU7 201 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 OCIAD1Q9NX40 245 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 INSIG2Q9Y5U4 225 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 V9GY05 133 aa3.56□□□□□ -1.84
RTN4-213ENST00000485749 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.56□□□□□ -1.84
RTN4-213ENST00000485749 ROBO1Q9Y6N7 1651 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 MYH10P35580 1976 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 TRDV1A0A1B0GX56 115 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 A0A1B0GXF2 115 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 WI2-2373I1.2A0A1W2PRP0 233 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 MSGN1A6NI15 193 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 C8orf87E5RJ46 101 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 ZNF670-ZNF695F2Z2N8 137 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 FNDC10F2Z333 226 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 G3V3Q6 166 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 K7ENP7 123 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 APOMO95445 188 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 EPPINO95925 133 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 NGFP01138 241 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 FRMD6-AS1P0C7T7 363 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 FCGR2CP31995 323 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 ARPP19P56211 112 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 C1QTNF8P60827 252 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 RPS23P62266 143 aaKnown RBP3.55□□□□□ -1.84
RTN4-213ENST00000485749 FKBP1AP62942 108 aaKnown RBP3.55□□□□□ -1.84
RTN4-213ENST00000485749 DHRS2Q13268 280 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 VMA21Q3ZAQ7 101 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 FKBP1CQ5VVH2 108 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 SBSNQ6UWP8 590 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 SSX8Q7RTT4 187 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 SLC35E3Q7Z769 313 aa3.55□□□□□ -1.84
RTN4-213ENST00000485749 LRRTM1Q86UE6 522 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms