RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 OR2T5Q6IEZ7 315 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 OR5H6Q8NGV6 325 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 OR2T29Q8NH02 315 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 OR2T6Q8NHC8 308 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 OR51E1Q8TCB6 317 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 SUCNR1Q9BXA5 334 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 ZNF696Q9H7X3 374 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 TMEM100Q9NV29 134 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 ZNF230Q9UIE0 474 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-205ENST00000485055 INSIG2Q9Y5U4 225 aa4.22□□□□□ -1.73
CCDC39-205ENST00000485055 CSMD1Q96PZ7 3565 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 A0A087WX48 190 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 FAM172BPA6NC97 362 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 ORC5O43913 435 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 OR7C1O76099 320 aaPredicted RBP4.21□□□□□ -1.73
CCDC39-205ENST00000485055 PGA5P0DJD9 388 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 AQP1P29972 269 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 MDH2P40926 338 aaKnown RBP4.21□□□□□ -1.73
CCDC39-205ENST00000485055 SMCPP49901 116 aaPredicted RBP4.21□□□□□ -1.73
CCDC39-205ENST00000485055 DLX1P56177 255 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 RPS27AP62979 156 aaKnown RBP4.21□□□□□ -1.73
CCDC39-205ENST00000485055 PSG7Q13046 419 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 ZNF266Q14584 549 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 Q6ZR03 302 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 TCF24Q7RTU0 167 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 LRP11Q86VZ4 500 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 AQP11Q8NBQ7 271 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 SLC25A40Q8TBP6 338 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 GALMQ96C23 342 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 MROQ9BYG7 248 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 GABARAPL1Q9H0R8 117 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 DYNLRB1Q9NP97 96 aa4.21□□□□□ -1.73
CCDC39-205ENST00000485055 FLNAP21333 2647 aaKnown RBP4.21□□□□□ -1.74
CCDC39-205ENST00000485055 MEIKINA0A087WXM9 373 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF593O00488 134 aaPredicted RBP4.21□□□□□ -1.74
CCDC39-205ENST00000485055 CRXO43186 299 aaPredicted RBP4.21□□□□□ -1.74
CCDC39-205ENST00000485055 FABP3P05413 133 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 OR8U8P0C7N1 319 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 CTLA4P16410 223 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 CFPP27918 469 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 CDKN2AP42771 156 aaKnown RBP4.21□□□□□ -1.74
CCDC39-205ENST00000485055 LAPTM4AQ15012 233 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 KRTAP24-1Q3LI83 254 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF404Q494X3 552 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 RNF212Q495C1 297 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 OTPQ5XKR4 325 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 PVRIGQ6DKI7 326 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 WDR82Q6UXN9 313 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 C15orf54Q8N8G6 183 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 LY6G5BQ8NDX9 201 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 OR10G4Q8NGN3 311 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 PIFOQ8TCI5 191 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 NPRL2Q8WTW4 380 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 CELSR1Q9NYQ6 3014 aa4.21□□□□□ -1.74
CCDC39-205ENST00000485055 FN1P02751 2386 aaKnown RBP4.2□□□□□ -1.74
CCDC39-205ENST00000485055 C11orf98E9PRG8 122 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 F5H5K5 113 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 XKRYO14609 159 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 WNT9BO14905 357 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 MRPS12O15235 138 aaKnown RBP4.2□□□□□ -1.74
CCDC39-205ENST00000485055 SLC2A10O95528 541 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 FAM107AO95990 144 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 RENP00797 406 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 CRYGDP07320 174 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 MPV17P39210 176 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 GUCA1AP43080 201 aaPredicted RBP4.2□□□□□ -1.74
CCDC39-205ENST00000485055 OR1E2P47887 323 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 BRWD1-AS2P59051 145 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 GRB2P62993 217 aaKnown RBP4.2□□□□□ -1.74
CCDC39-205ENST00000485055 VAX1Q5SQQ9 334 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 SLC25A30Q5SVS4 291 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 LINC01590Q5TEZ4 76 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF343Q6P1L6 599 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 NAA40Q86UY6 237 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF485Q8NCK3 441 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 RTBDNQ9BSG5 229 aaPredicted RBP4.2□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF747Q9BV97 191 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 CMC2Q9NRP2 79 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 MYRFQ9Y2G1 1151 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 U3KQ87 197 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.2□□□□□ -1.74
CCDC39-205ENST00000485055 TCRBV3S1A0A5B6 114 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF850A8MQ14 1090 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 NDUFB8O95169 186 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 GADD45GO95257 159 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 OR9G9P0C7N8 305 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 UBBP0CG47 229 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 PSG1P11464 419 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 IL2RGP31785 369 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 GPR183P32249 361 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 SEC61BP60468 96 aaKnown RBP4.2□□□□□ -1.74
CCDC39-205ENST00000485055 OR8B8Q15620 311 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 MIDNQ504T8 468 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 TPTE2P1Q5T6R2 138 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF626Q68DY1 528 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF101Q8IZC7 436 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 Q96M85 177 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 SSBP4Q9BWG4 385 aaPredicted RBP4.2□□□□□ -1.74
CCDC39-205ENST00000485055 C1QTNF6Q9BXI9 259 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 OR52D1Q9H346 318 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms