RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PPYP01298 95 aa8.62□□□□□ -1.03
SCFD1-206ENST00000484733 CLEC2LP0C7M8 214 aa8.62□□□□□ -1.03
SCFD1-206ENST00000484733 C8orf88P0DMB2 117 aa8.62□□□□□ -1.03
SCFD1-206ENST00000484733 CATR1Q13166 79 aa8.62□□□□□ -1.03
SCFD1-206ENST00000484733 CLEC19AQ6UXS0 136 aa8.62□□□□□ -1.03
SCFD1-206ENST00000484733 C19orf35Q6ZS72 473 aa8.62□□□□□ -1.03
SCFD1-206ENST00000484733 SPAG16Q8N0X2 631 aa8.62□□□□□ -1.03
SCFD1-206ENST00000484733 OR13F1Q8NGS4 319 aa8.62□□□□□ -1.03
SCFD1-206ENST00000484733 SECTM1Q8WVN6 248 aa8.62□□□□□ -1.03
SCFD1-206ENST00000484733 CXorf58Q96LI9 332 aa8.62□□□□□ -1.03
SCFD1-206ENST00000484733 AUNIPQ9H7T9 357 aa8.62□□□□□ -1.03
SCFD1-206ENST00000484733 SRD5A3Q9H8P0 318 aa8.62□□□□□ -1.03
SCFD1-206ENST00000484733 TRAV25A0A0B4J276 109 aa8.61□□□□□ -1.03
SCFD1-206ENST00000484733 UPK2O00526 184 aa8.61□□□□□ -1.03
SCFD1-206ENST00000484733 HLA-AP01891 365 aaKnown RBP8.61□□□□□ -1.03
SCFD1-206ENST00000484733 EDN2P20800 178 aa8.61□□□□□ -1.03
SCFD1-206ENST00000484733 ELLP55199 621 aaPredicted RBP8.61□□□□□ -1.03
SCFD1-206ENST00000484733 OR2B8PP59922 312 aa8.61□□□□□ -1.03
SCFD1-206ENST00000484733 GUCA2BQ16661 112 aa8.61□□□□□ -1.03
SCFD1-206ENST00000484733 ZNF57Q68EA5 555 aaPredicted RBP8.61□□□□□ -1.03
SCFD1-206ENST00000484733 THOC7Q6I9Y2 204 aaKnown RBP8.61□□□□□ -1.03
SCFD1-206ENST00000484733 CADM3Q8N126 398 aa8.61□□□□□ -1.03
SCFD1-206ENST00000484733 GVQW1Q8N7I0 195 aa8.61□□□□□ -1.03
SCFD1-206ENST00000484733 MARC2Q969Z3 335 aa8.61□□□□□ -1.03
SCFD1-206ENST00000484733 SLC5A7Q9GZV3 580 aa8.61□□□□□ -1.03
SCFD1-206ENST00000484733 RETNQ9HD89 108 aa8.61□□□□□ -1.03
SCFD1-206ENST00000484733 DIABLOQ9NR28 239 aa8.61□□□□□ -1.03
SCFD1-206ENST00000484733 LYSTQ99698 3801 aa8.61□□□□□ -1.03
SCFD1-206ENST00000484733 TMEM213A2RRL7 107 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 ATP6V1G2O95670 118 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 NQO2P16083 231 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 SSX9Q7RTT3 188 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 SLC16A13Q7RTY0 426 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 CD300LFQ8TDQ1 290 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 BORCS5Q969J3 196 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 WDR89Q96FK6 387 aaPredicted RBP8.6□□□□□ -1.03
SCFD1-206ENST00000484733 PLEKHA2Q9HB19 425 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 GAR1Q9NY12 217 aaKnown RBP8.6□□□□□ -1.03
SCFD1-206ENST00000484733 IGLC7A0M8Q6 106 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 IGHV3-23P01764 117 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 PTHLHP12272 177 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 ANKRD55Q3KP44 614 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 IDNKQ5T6J7 187 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 OR5AP2Q8NGF4 316 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 ZNF502Q8TBZ5 544 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 GPHA2Q96T91 129 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 COMMD9Q9P000 198 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 MLXQ9UH92 298 aa8.6□□□□□ -1.03
SCFD1-206ENST00000484733 SULT1C2O00338 296 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 TNFSF12O43508 249 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 DEFA4P12838 97 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 MYOD1P15172 320 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 PTBP1P26599 531 aaKnown RBP eCLIP8.59□□□□□ -1.03
SCFD1-206ENST00000484733 MXD1Q05195 221 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 UXS1Q8NBZ7 420 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 VN1R17PQ8TDU5 208 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 ATP6V0BQ99437 205 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 RNF167Q9H6Y7 350 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 HRASLSQ9HDD0 168 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 ANAPC10Q9UM13 185 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 CLEC3BP05452 202 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 DHRS11Q6UWP2 260 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 ZNF818PQ6ZRF7 136 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 HSD17B13Q7Z5P4 300 aaPredicted RBP8.59□□□□□ -1.03
SCFD1-206ENST00000484733 TMEM61Q8N0U2 210 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 ZNF436Q9C0F3 470 aaPredicted RBP8.59□□□□□ -1.03
SCFD1-206ENST00000484733 THYN1Q9P016 225 aa8.59□□□□□ -1.03
SCFD1-206ENST00000484733 MRPL27Q9P0M9 148 aaKnown RBP8.59□□□□□ -1.03
SCFD1-206ENST00000484733 CSMD3Q7Z407 3707 aa8.59□□□□□ -1.04
SCFD1-206ENST00000484733 ZNF320A2RRD8 509 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 MFSD2BA6NFX1 497 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 CYB5BO43169 146 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 XRCC3O43542 346 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 JTBO76095 146 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 REG1AP05451 166 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 CROCCP3Q8IVE0 287 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 CACNG8Q8WXS5 425 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 QTRT1Q9BXR0 403 aaKnown RBP8.58□□□□□ -1.04
SCFD1-206ENST00000484733 COMMD5Q9GZQ3 224 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 WFDC10AQ9H1F0 79 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 TMEM140Q9NV12 185 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 UFC1Q9Y3C8 167 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 S4R3C0 116 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 TRAV3A0A0B4J244 114 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 OR52B4Q8NGK2 314 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 FAM110AQ9BQ89 295 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 GGTLC1Q9BX51 225 aa8.58□□□□□ -1.04
SCFD1-206ENST00000484733 LOC100506127A0A0U1RQW1 187 aa8.57□□□□□ -1.04
SCFD1-206ENST00000484733 TRAPPC2P0DI81 140 aa8.57□□□□□ -1.04
SCFD1-206ENST00000484733 TRAPPC2BP0DI82 140 aa8.57□□□□□ -1.04
SCFD1-206ENST00000484733 NAT1P18440 290 aa8.57□□□□□ -1.04
SCFD1-206ENST00000484733 GNRHRP30968 328 aa8.57□□□□□ -1.04
SCFD1-206ENST00000484733 FXYD4P59646 89 aa8.57□□□□□ -1.04
SCFD1-206ENST00000484733 TM4SF20Q53R12 229 aa8.57□□□□□ -1.04
SCFD1-206ENST00000484733 LOC102724200A0A096LPH7 203 aaPredicted RBP8.57□□□□□ -1.04
SCFD1-206ENST00000484733 TEX50A0A1B0GTY4 177 aa8.57□□□□□ -1.04
SCFD1-206ENST00000484733 S1PR2O95136 353 aa8.57□□□□□ -1.04
SCFD1-206ENST00000484733 SERPINE2P07093 398 aa8.57□□□□□ -1.04
SCFD1-206ENST00000484733 HERV-K104P61576 105 aa8.57□□□□□ -1.04
SCFD1-206ENST00000484733 KCTD21Q4G0X4 260 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms