RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 NUDT19A8MXV4 375 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 PRSS46E5RG02 174 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 TRIM77I1YAP6 450 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 MYOD1P15172 320 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 MDKP21741 143 aaPredicted RBP11.32□□□□□ -0.6
CLK3-204ENST00000483723 PXDC1Q5TGL8 231 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 CENPVQ7Z7K6 275 aaPredicted RBP11.32□□□□□ -0.6
CLK3-204ENST00000483723 MOB3BQ86TA1 216 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 THNSL2Q86YJ6 484 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 OR2G3Q8NGZ4 309 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 TMEM170AQ8WVE7 144 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 MARC2Q969Z3 335 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 WDR61Q9GZS3 305 aaKnown RBP11.32□□□□□ -0.6
CLK3-204ENST00000483723 RFNGQ9Y644 331 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 MYO18BQ8IUG5 2567 aa11.31□□□□□ -0.6
CLK3-204ENST00000483723 RAB19A4D1S5 217 aa11.31□□□□□ -0.6
CLK3-204ENST00000483723 UMAD1C9J7I0 102 aa11.31□□□□□ -0.6
CLK3-204ENST00000483723 RNASEK-C17orf49H0YIS7 233 aa11.31□□□□□ -0.6
CLK3-204ENST00000483723 RRHO14718 337 aa11.31□□□□□ -0.6
CLK3-204ENST00000483723 HOXB4P17483 251 aaPredicted RBP11.31□□□□□ -0.6
CLK3-204ENST00000483723 CEACAM3P40198 252 aa11.31□□□□□ -0.6
CLK3-204ENST00000483723 ATP5IP56385 69 aaPredicted RBP11.31□□□□□ -0.6
CLK3-204ENST00000483723 RPL8P62917 257 aaKnown RBP11.31□□□□□ -0.6
CLK3-204ENST00000483723 KLRD1Q13241 179 aa11.31□□□□□ -0.6
CLK3-204ENST00000483723 VMA21Q3ZAQ7 101 aa11.31□□□□□ -0.6
CLK3-204ENST00000483723 OR8G2PQ6IF36 304 aa11.31□□□□□ -0.6
CLK3-204ENST00000483723 LILRB2Q8N423 598 aa11.31□□□□□ -0.6
CLK3-204ENST00000483723 SCGB1C1Q8TD33 95 aa11.31□□□□□ -0.6
CLK3-204ENST00000483723 PSMG3Q9BT73 122 aaPredicted RBP11.31□□□□□ -0.6
CLK3-204ENST00000483723 TMEM147Q9BVK8 224 aa11.31□□□□□ -0.6
CLK3-204ENST00000483723 NDUFA4L2Q9NRX3 87 aa11.31□□□□□ -0.6
CLK3-204ENST00000483723 UBR5O95071 2799 aaPredicted RBP11.3□□□□□ -0.6
CLK3-204ENST00000483723 IGHV3-72A0A0B4J1Y9 119 aa11.3□□□□□ -0.6
CLK3-204ENST00000483723 A1L4Q6 167 aa11.3□□□□□ -0.6
CLK3-204ENST00000483723 OOSP1A8MZH6 123 aa11.3□□□□□ -0.6
CLK3-204ENST00000483723 FAM157AC9JC47 383 aa11.3□□□□□ -0.6
CLK3-204ENST00000483723 IFNA10P01566 189 aa11.3□□□□□ -0.6
CLK3-204ENST00000483723 CD1BP29016 333 aa11.3□□□□□ -0.6
CLK3-204ENST00000483723 HOXA1P49639 335 aaPredicted RBP11.3□□□□□ -0.6
CLK3-204ENST00000483723 DVL1P1P54792 670 aaPredicted RBP11.3□□□□□ -0.6
CLK3-204ENST00000483723 RUNX1Q01196 453 aa11.3□□□□□ -0.6
CLK3-204ENST00000483723 BSXQ3C1V8 233 aa11.3□□□□□ -0.6
CLK3-204ENST00000483723 MINOS1Q5TGZ0 78 aa11.3□□□□□ -0.6
CLK3-204ENST00000483723 CLEC2AQ6UVW9 174 aa11.3□□□□□ -0.6
CLK3-204ENST00000483723 OR1L8Q8NGR8 309 aa11.3□□□□□ -0.6
CLK3-204ENST00000483723 CFHR4Q92496 578 aa11.3□□□□□ -0.6
CLK3-204ENST00000483723 TBX15Q96SF7 602 aa11.3□□□□□ -0.6
CLK3-204ENST00000483723 GGACTQ9BVM4 153 aa11.3□□□□□ -0.6
CLK3-204ENST00000483723 MINOS1-NBL1R4GNA1 71 aa11.3□□□□□ -0.6
CLK3-204ENST00000483723 IGHV4-61A0A0C4DH41 118 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 DSCR9P59020 149 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 ETV3LQ6ZN32 361 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 Q6ZRG5 221 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 TAF15Q92804 592 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLK3-204ENST00000483723 ENY2Q9NPA8 101 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 UQCC1Q9NVA1 299 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 TIMM9Q9Y5J7 89 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 TNCP24821 2201 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 TEX46H3BTG2 121 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 TOX4O94842 621 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 RAB11AP62491 216 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 SERF2P84101 59 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 PAX8Q06710 450 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 PJVKQ0ZLH3 352 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 PSG5Q15238 335 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 IL34Q6ZMJ4 242 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 TMEM182Q6ZP80 229 aaPredicted RBP11.29□□□□□ -0.6
CLK3-204ENST00000483723 LHFPL4Q7Z7J7 247 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 SLC24A4Q8NFF2 622 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 COMMD5Q9GZQ3 224 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 ZNF430Q9H8G1 570 aaPredicted RBP11.29□□□□□ -0.6
CLK3-204ENST00000483723 PLEKHA3Q9HB20 300 aa11.29□□□□□ -0.6
CLK3-204ENST00000483723 ASH1LQ9NR48 2969 aaKnown RBP11.29□□□□□ -0.6
CLK3-204ENST00000483723 IGHV4-30-2A0A087WSY4 118 aa11.28□□□□□ -0.6
CLK3-204ENST00000483723 CGB1A6NKQ9 187 aa11.28□□□□□ -0.6
CLK3-204ENST00000483723 E7EUB6 86 aa11.28□□□□□ -0.6
CLK3-204ENST00000483723 I3L521 148 aa11.28□□□□□ -0.6
CLK3-204ENST00000483723 TIMM23O14925 209 aa11.28□□□□□ -0.6
CLK3-204ENST00000483723 SLC25A17O43808 307 aa11.28□□□□□ -0.6
CLK3-204ENST00000483723 VENTXO95231 258 aa11.28□□□□□ -0.6
CLK3-204ENST00000483723 NPY1RP25929 384 aa11.28□□□□□ -0.6
CLK3-204ENST00000483723 UBE2E1P51965 193 aa11.28□□□□□ -0.6
CLK3-204ENST00000483723 F2RL1P55085 397 aa11.28□□□□□ -0.6
CLK3-204ENST00000483723 DLK1P80370 383 aa11.28□□□□□ -0.6
CLK3-204ENST00000483723 SLC25A24Q6NUK1 477 aa11.28□□□□□ -0.6
CLK3-204ENST00000483723 UQCC3Q6UW78 93 aa11.28□□□□□ -0.6
CLK3-204ENST00000483723 DPPA3Q6W0C5 159 aa11.28□□□□□ -0.6
CLK3-204ENST00000483723 NRGNQ92686 78 aa11.28□□□□□ -0.6
CLK3-204ENST00000483723 TBL2Q9Y4P3 447 aaKnown RBP11.28□□□□□ -0.6
CLK3-204ENST00000483723 FLNCQ14315 2725 aa11.27□□□□□ -0.6
CLK3-204ENST00000483723 CA2P00918 260 aa11.27□□□□□ -0.61
CLK3-204ENST00000483723 MAS1LP35410 378 aa11.27□□□□□ -0.61
CLK3-204ENST00000483723 CAMLGP49069 296 aa11.27□□□□□ -0.61
CLK3-204ENST00000483723 FHITP49789 147 aa11.27□□□□□ -0.61
CLK3-204ENST00000483723 PRSS8Q16651 343 aa11.27□□□□□ -0.61
CLK3-204ENST00000483723 C2orf83Q53S99 150 aa11.27□□□□□ -0.61
CLK3-204ENST00000483723 TOR2AQ5JU69 321 aa11.27□□□□□ -0.61
CLK3-204ENST00000483723 MMD2Q8IY49 270 aa11.27□□□□□ -0.61
CLK3-204ENST00000483723 RSG1Q9BU20 258 aa11.27□□□□□ -0.61
CLK3-204ENST00000483723 HRH4Q9H3N8 390 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms