RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 LY6G6DO95868 133 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 SCGB1D2O95969 90 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 FOSL1P15407 271 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 TMEM11P17152 192 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 VDAC2P45880 294 aaPredicted RBP6.56□□□□□ -1.36
USP4-210ENST00000483212 PAX9P55771 341 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 S100A10P60903 97 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 RPL8P62917 257 aaKnown RBP6.56□□□□□ -1.36
USP4-210ENST00000483212 FGL1Q08830 312 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 PJVKQ0ZLH3 352 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 HES1Q14469 280 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 HNF4GQ14541 408 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 MMDQ15546 238 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 PRSS8Q16651 343 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 C5orf64Q2M2E5 130 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 ZFP69Q49AA0 526 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 TMEM65Q6PI78 240 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 Q6YL49 198 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 NOXA1Q86UR1 476 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 PPP1R27Q86WC6 154 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 TEX29Q8N6K0 151 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 OR8H1Q8NGG4 311 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 OR4A16Q8NH70 328 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 C22orf15Q8WYQ4 148 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 RBM14Q96PK6 669 aaKnown RBP6.56□□□□□ -1.36
USP4-210ENST00000483212 KRTAP9-9Q9BYP9 154 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 MAGT1Q9H0U3 335 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 FBXL15Q9H469 300 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 RBKSQ9H477 322 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 MBD2Q9UBB5 411 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 METTL1Q9UBP6 276 aaKnown RBP6.56□□□□□ -1.36
USP4-210ENST00000483212 PRNDQ9UKY0 176 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 TNFSF18Q9UNG2 199 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 FAM96BQ9Y3D0 163 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 LSM5Q9Y4Y9 91 aaKnown RBP6.56□□□□□ -1.36
USP4-210ENST00000483212 ZFHX3Q15911 3703 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 MXRA5Q9NR99 2828 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 HIVEP1P15822 2718 aa6.56□□□□□ -1.36
USP4-210ENST00000483212 TEX50A0A1B0GTY4 177 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 RNF222A6NCQ9 220 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 MSGN1A6NI15 193 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 SYNGR2O43760 224 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 CHST1O43916 411 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 SNAPC5O75971 98 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 OR2F2O95006 317 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 AMY1AP04745 511 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 CD99P14209 185 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 IER3P46695 156 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 NKX2-5P52952 324 aaPredicted RBP6.55□□□□□ -1.36
USP4-210ENST00000483212 SPCS3P61009 180 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 HSPE1P61604 102 aaKnown RBP6.55□□□□□ -1.36
USP4-210ENST00000483212 PRCDQ00LT1 54 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 C10orf55Q5SWW7 151 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 LAMTOR1Q6IAA8 161 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 MMD2Q8IY49 270 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 C9orf62Q8N4C0 152 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 C5orf56Q8N8D9 126 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 OR5B3Q8NH48 314 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 GRPEL2Q8TAA5 225 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 HYLS1Q96M11 299 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 NDUFA4L2Q9NRX3 87 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 ZFP57Q9NU63 452 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 OR51B2Q9Y5P1 312 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 TLN2Q9Y4G6 2542 aa6.55□□□□□ -1.36
USP4-210ENST00000483212 FXYD6-FXYD2A0A087WZ82 144 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 HMSDA8MTL9 139 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 TEX22C9J3V5 150 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 INS-IGF2F8WCM5 200 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 FGF16O43320 207 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 KCNAB3O43448 404 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 SSSCA1O60232 199 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 CA2P00918 260 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 IGHV4-59P01825 116 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 HNRNPCP07910 306 aaKnown RBP eCLIP6.54□□□□□ -1.36
USP4-210ENST00000483212 PET100P0DJ07 73 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 CXCL2P19875 107 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 MAS1LP35410 378 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 P2RY1P47900 373 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 COMPP49747 757 aaPredicted RBP6.54□□□□□ -1.36
USP4-210ENST00000483212 TAS2R30P59541 319 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 NDPQ00604 133 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 SPINK9Q5DT21 86 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 LCE3BQ5TA77 95 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 LCE2CQ5TA81 110 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 TMEM219Q86XT9 240 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 THAP6Q8TBB0 222 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 DTD1Q8TEA8 209 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 TMEM170AQ8WVE7 144 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 SMIM8Q96KF7 97 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 AQP10Q96PS8 301 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 SLC25A33Q9BSK2 321 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 FKBP11Q9NYL4 201 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 CACFD1Q9UGQ2 172 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 MOB4Q9Y3A3 225 aa6.54□□□□□ -1.36
USP4-210ENST00000483212 IGHV7-81A0A0B4J1V7 117 aa6.53□□□□□ -1.36
USP4-210ENST00000483212 IGLC7A0M8Q6 106 aa6.53□□□□□ -1.36
USP4-210ENST00000483212 IGSF23A1L1A6 192 aa6.53□□□□□ -1.36
USP4-210ENST00000483212 NCBP2LA6PVI3 153 aaKnown RBP6.53□□□□□ -1.36
USP4-210ENST00000483212 E5RGE8 158 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms