RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 C10orf55Q5SWW7 151 aa12.9□□□□□ -0.34
HMGN1-214ENST00000482733 ETV3LQ6ZN32 361 aa12.9□□□□□ -0.34
HMGN1-214ENST00000482733 TTC9CQ8N5M4 171 aa12.9□□□□□ -0.34
HMGN1-214ENST00000482733 MS4A10Q96PG2 267 aa12.9□□□□□ -0.34
HMGN1-214ENST00000482733 P2RX4Q99571 388 aa12.9□□□□□ -0.34
HMGN1-214ENST00000482733 TSC22D3Q99576 134 aa12.9□□□□□ -0.34
HMGN1-214ENST00000482733 COMMD5Q9GZQ3 224 aa12.9□□□□□ -0.34
HMGN1-214ENST00000482733 GNB4Q9HAV0 340 aa12.9□□□□□ -0.34
HMGN1-214ENST00000482733 COA4Q9NYJ1 87 aa12.9□□□□□ -0.34
HMGN1-214ENST00000482733 GPR132Q9UNW8 380 aa12.9□□□□□ -0.34
HMGN1-214ENST00000482733 C3orf85A0A1B0GTC6 90 aa12.89□□□□□ -0.35
HMGN1-214ENST00000482733 A6NHS1 94 aa12.89□□□□□ -0.35
HMGN1-214ENST00000482733 I3L521 148 aa12.89□□□□□ -0.35
HMGN1-214ENST00000482733 SNAPC5O75971 98 aa12.89□□□□□ -0.35
HMGN1-214ENST00000482733 ATG12O94817 140 aa12.89□□□□□ -0.35
HMGN1-214ENST00000482733 G6PCP35575 357 aa12.89□□□□□ -0.35
HMGN1-214ENST00000482733 THOC7Q6I9Y2 204 aaKnown RBP12.89□□□□□ -0.35
HMGN1-214ENST00000482733 MRPL41Q8IXM3 137 aaKnown RBP12.89□□□□□ -0.35
HMGN1-214ENST00000482733 LINC00482Q8N8I6 264 aa12.89□□□□□ -0.35
HMGN1-214ENST00000482733 ADAD2Q8NCV1 583 aaKnown RBP12.89□□□□□ -0.35
HMGN1-214ENST00000482733 CASTOR1Q8WTX7 329 aa12.89□□□□□ -0.35
HMGN1-214ENST00000482733 RAX2Q96IS3 184 aa12.89□□□□□ -0.35
HMGN1-214ENST00000482733 FYTTD1Q96QD9 318 aaKnown RBP12.89□□□□□ -0.35
HMGN1-214ENST00000482733 SRSF8Q9BRL6 282 aaKnown RBP12.89□□□□□ -0.35
HMGN1-214ENST00000482733 NPIPB5A8MRT5 1133 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 TEX22C9J3V5 150 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 DUS4LO95620 317 aaKnown RBP12.88□□□□□ -0.35
HMGN1-214ENST00000482733 LGALS1P09382 135 aaKnown RBP12.88□□□□□ -0.35
HMGN1-214ENST00000482733 APELAP0DMC3 54 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 INPP1P49441 399 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 OR2B8PP59922 312 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 ZNF45Q02386 682 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 TRIQKQ629K1 86 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 LINC00299Q6ZSB3 139 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 OR11H1Q8NG94 326 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 OR1N2Q8NGR9 330 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 RCC1LQ96I51 464 aaKnown RBP12.88□□□□□ -0.35
HMGN1-214ENST00000482733 USMG5Q96IX5 58 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 RTBDNQ9BSG5 229 aaPredicted RBP12.88□□□□□ -0.35
HMGN1-214ENST00000482733 C5orf66Q9H5L9 145 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 FKBP11Q9NYL4 201 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 PRNDQ9UKY0 176 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 ZNF257Q9Y2Q1 563 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 PLXNB1O43157 2135 aa12.88□□□□□ -0.35
HMGN1-214ENST00000482733 TRAV3A0A0B4J244 114 aa12.87□□□□□ -0.35
HMGN1-214ENST00000482733 TEX13DA0A0J9YY54 714 aaPredicted RBP12.87□□□□□ -0.35
HMGN1-214ENST00000482733 C13orf42A0A1B0GVH6 325 aa12.87□□□□□ -0.35
HMGN1-214ENST00000482733 DHFRP00374 187 aa12.87□□□□□ -0.35
HMGN1-214ENST00000482733 FHL3Q13643 280 aa12.87□□□□□ -0.35
HMGN1-214ENST00000482733 DEFB136Q30KP8 78 aa12.87□□□□□ -0.35
HMGN1-214ENST00000482733 ZNF57Q68EA5 555 aaPredicted RBP12.87□□□□□ -0.35
HMGN1-214ENST00000482733 H2BFWTQ7Z2G1 175 aa12.87□□□□□ -0.35
HMGN1-214ENST00000482733 HSD17B13Q7Z5P4 300 aaPredicted RBP12.87□□□□□ -0.35
HMGN1-214ENST00000482733 SEC22AQ96IW7 307 aa12.87□□□□□ -0.35
HMGN1-214ENST00000482733 TP53RKQ96S44 253 aa12.87□□□□□ -0.35
HMGN1-214ENST00000482733 MCRIP2Q9BUT9 160 aaKnown RBP12.87□□□□□ -0.35
HMGN1-214ENST00000482733 QTRT1Q9BXR0 403 aaKnown RBP12.87□□□□□ -0.35
HMGN1-214ENST00000482733 HMX3A6NHT5 357 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 E7EUB6 86 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 IGKV1-39P01597 117 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 IGKV1D-39P04432 117 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 CRYGCP07315 174 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 OR8U8P0C7N1 319 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 UCP1P25874 307 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 DHODHQ02127 395 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 ZNF616Q08AN1 781 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 TRIM16LQ309B1 348 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 SAMD5Q5TGI4 173 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 OR1L8Q8NGR8 309 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 DPF1Q92782 380 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 DUX3Q96PT4 197 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 OR5B12Q96R08 314 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 GPR61Q9BZJ8 451 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 NAA60Q9H7X0 242 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 BATF3Q9NR55 127 aa12.86□□□□□ -0.35
HMGN1-214ENST00000482733 A0A1B0GW64 132 aa12.85□□□□□ -0.35
HMGN1-214ENST00000482733 CRYM-AS1A6NIL9 109 aa12.85□□□□□ -0.35
HMGN1-214ENST00000482733 FAM223BA6NKX1 122 aa12.85□□□□□ -0.35
HMGN1-214ENST00000482733 TRAPPC2P0DI81 140 aa12.85□□□□□ -0.35
HMGN1-214ENST00000482733 TRAPPC2BP0DI82 140 aa12.85□□□□□ -0.35
HMGN1-214ENST00000482733 MYOD1P15172 320 aa12.85□□□□□ -0.35
HMGN1-214ENST00000482733 PSMB6P28072 239 aa12.85□□□□□ -0.35
HMGN1-214ENST00000482733 CNPY1Q3B7I2 92 aa12.85□□□□□ -0.35
HMGN1-214ENST00000482733 FAM223AQ8IWN6 122 aa12.85□□□□□ -0.35
HMGN1-214ENST00000482733 SGPP2Q8IWX5 399 aa12.85□□□□□ -0.35
HMGN1-214ENST00000482733 OR5B3Q8NH48 314 aa12.85□□□□□ -0.35
HMGN1-214ENST00000482733 OR4A16Q8NH70 328 aa12.85□□□□□ -0.35
HMGN1-214ENST00000482733 SLC25A21Q9BQT8 299 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-214ENST00000482733 TMEM222Q9H0R3 208 aa12.85□□□□□ -0.35
HMGN1-214ENST00000482733 KCNIP3Q9Y2W7 256 aa12.85□□□□□ -0.35
HMGN1-214ENST00000482733 OR51B2Q9Y5P1 312 aa12.85□□□□□ -0.35
HMGN1-214ENST00000482733 TRBV9A0A0B4J1U6 114 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 TEX50A0A1B0GTY4 177 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 NAP1L6A6NFF2 107 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 C15orf61A6NNL5 157 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 LINC01619G3V211 115 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 IGHV3-11P01762 117 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 HSPB1P04792 205 aaKnown RBP12.84□□□□□ -0.35
HMGN1-214ENST00000482733 OR5AC1P0C628 307 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 HIST1H1BP16401 226 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms