RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 A0A1B0GW64 132 aa12.71□□□□□ -0.37
VAMP4-204ENST00000482519 UPK2O00526 184 aa12.71□□□□□ -0.37
VAMP4-204ENST00000482519 KRASP01116 189 aa12.71□□□□□ -0.37
VAMP4-204ENST00000482519 TMBIM6P55061 237 aa12.71□□□□□ -0.37
VAMP4-204ENST00000482519 SYNJ2BPP57105 145 aa12.71□□□□□ -0.37
VAMP4-204ENST00000482519 CD69Q07108 199 aa12.71□□□□□ -0.37
VAMP4-204ENST00000482519 EXOSC2Q13868 293 aaKnown RBP12.71□□□□□ -0.37
VAMP4-204ENST00000482519 C15orf32Q32M92 178 aa12.71□□□□□ -0.37
VAMP4-204ENST00000482519 C15orf40Q8WUR7 153 aa12.71□□□□□ -0.37
VAMP4-204ENST00000482519 COMMD5Q9GZQ3 224 aa12.71□□□□□ -0.37
VAMP4-204ENST00000482519 MIXL1Q9H2W2 232 aa12.71□□□□□ -0.37
VAMP4-204ENST00000482519 COMMD9Q9P000 198 aa12.71□□□□□ -0.37
VAMP4-204ENST00000482519 TRBV9A0A0B4J1U6 114 aa12.7□□□□□ -0.38
VAMP4-204ENST00000482519 NPIPB5A8MRT5 1133 aa12.7□□□□□ -0.38
VAMP4-204ENST00000482519 CD3DP04234 171 aa12.7□□□□□ -0.38
VAMP4-204ENST00000482519 DEFA4P12838 97 aa12.7□□□□□ -0.38
VAMP4-204ENST00000482519 PSMB6P28072 239 aa12.7□□□□□ -0.38
VAMP4-204ENST00000482519 OR2B8PP59922 312 aa12.7□□□□□ -0.38
VAMP4-204ENST00000482519 DCTN2Q13561 401 aaKnown RBP12.7□□□□□ -0.38
VAMP4-204ENST00000482519 RPEL1Q2QD12 228 aa12.7□□□□□ -0.38
VAMP4-204ENST00000482519 RNASE10Q5GAN6 216 aaKnown RBP12.7□□□□□ -0.38
VAMP4-204ENST00000482519 VAX1Q5SQQ9 334 aa12.7□□□□□ -0.38
VAMP4-204ENST00000482519 HAPLN4Q86UW8 402 aa12.7□□□□□ -0.38
VAMP4-204ENST00000482519 FBXL7Q9UJT9 491 aa12.7□□□□□ -0.38
VAMP4-204ENST00000482519 MARCH11A6NNE9 402 aa12.69□□□□□ -0.38
VAMP4-204ENST00000482519 DHFRP00374 187 aa12.69□□□□□ -0.38
VAMP4-204ENST00000482519 IGHV3-23P01764 117 aa12.69□□□□□ -0.38
VAMP4-204ENST00000482519 PGAM2P15259 253 aa12.69□□□□□ -0.38
VAMP4-204ENST00000482519 SPNP16150 400 aa12.69□□□□□ -0.38
VAMP4-204ENST00000482519 G6PCP35575 357 aa12.69□□□□□ -0.38
VAMP4-204ENST00000482519 KLF5Q13887 457 aaPredicted RBP12.69□□□□□ -0.38
VAMP4-204ENST00000482519 POU2AF1Q16633 256 aa12.69□□□□□ -0.38
VAMP4-204ENST00000482519 TBC1D26Q86UD7 250 aa12.69□□□□□ -0.38
VAMP4-204ENST00000482519 SLC38A6Q8IZM9 456 aa12.69□□□□□ -0.38
VAMP4-204ENST00000482519 OR6Q1Q8NGQ2 317 aa12.69□□□□□ -0.38
VAMP4-204ENST00000482519 C6orf62Q9GZU0 229 aaPredicted RBP12.69□□□□□ -0.38
VAMP4-204ENST00000482519 MTFP1Q9UDX5 166 aa12.69□□□□□ -0.38
VAMP4-204ENST00000482519 S4R3C0 116 aa12.69□□□□□ -0.38
VAMP4-204ENST00000482519 SORL1Q92673 2214 aa12.69□□□□□ -0.38
VAMP4-204ENST00000482519 CGB1A6NKQ9 187 aa12.68□□□□□ -0.38
VAMP4-204ENST00000482519 TATDN3Q17R31 274 aa12.68□□□□□ -0.38
VAMP4-204ENST00000482519 ZNF585BQ52M93 769 aa12.68□□□□□ -0.38
VAMP4-204ENST00000482519 OR9G4Q8NGQ1 327 aa12.68□□□□□ -0.38
VAMP4-204ENST00000482519 DYNC2LI1Q8TCX1 351 aa12.68□□□□□ -0.38
VAMP4-204ENST00000482519 DIRAS2Q96HU8 199 aa12.68□□□□□ -0.38
VAMP4-204ENST00000482519 HINT2Q9BX68 163 aa12.68□□□□□ -0.38
VAMP4-204ENST00000482519 CCDC59Q9P031 241 aaKnown RBP12.68□□□□□ -0.38
VAMP4-204ENST00000482519 NSG2Q9Y328 171 aa12.68□□□□□ -0.38
VAMP4-204ENST00000482519 PPP5D1E7EU14 171 aa12.67□□□□□ -0.38
VAMP4-204ENST00000482519 H3BMQ9 156 aa12.67□□□□□ -0.38
VAMP4-204ENST00000482519 SNAPC5O75971 98 aa12.67□□□□□ -0.38
VAMP4-204ENST00000482519 TPPPO94811 219 aa12.67□□□□□ -0.38
VAMP4-204ENST00000482519 NDUFB8O95169 186 aa12.67□□□□□ -0.38
VAMP4-204ENST00000482519 CRYGCP07315 174 aa12.67□□□□□ -0.38
VAMP4-204ENST00000482519 PI3P19957 117 aa12.67□□□□□ -0.38
VAMP4-204ENST00000482519 UCP3P55916 312 aa12.67□□□□□ -0.38
VAMP4-204ENST00000482519 IL18Q14116 193 aa12.67□□□□□ -0.38
VAMP4-204ENST00000482519 SCGB2B2Q4G0G5 96 aa12.67□□□□□ -0.38
VAMP4-204ENST00000482519 OR10W1Q8NGF6 305 aa12.67□□□□□ -0.38
VAMP4-204ENST00000482519 OR4D10Q8NGI6 311 aa12.67□□□□□ -0.38
VAMP4-204ENST00000482519 B9D2Q9BPU9 175 aa12.67□□□□□ -0.38
VAMP4-204ENST00000482519 BCL7BQ9BQE9 202 aa12.67□□□□□ -0.38
VAMP4-204ENST00000482519 QTRT1Q9BXR0 403 aaKnown RBP12.67□□□□□ -0.38
VAMP4-204ENST00000482519 LSM4Q9Y4Z0 139 aaKnown RBP12.67□□□□□ -0.38
VAMP4-204ENST00000482519 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.66□□□□□ -0.38
VAMP4-204ENST00000482519 TEX50A0A1B0GTY4 177 aa12.66□□□□□ -0.38
VAMP4-204ENST00000482519 CCDC160A6NGH7 325 aa12.66□□□□□ -0.38
VAMP4-204ENST00000482519 GABARAPH6UMI1 98 aa12.66□□□□□ -0.38
VAMP4-204ENST00000482519 BMPR1BO00238 502 aa12.66□□□□□ -0.38
VAMP4-204ENST00000482519 TRAPPC2P0DI81 140 aa12.66□□□□□ -0.38
VAMP4-204ENST00000482519 TRAPPC2BP0DI82 140 aa12.66□□□□□ -0.38
VAMP4-204ENST00000482519 CTRB1P17538 263 aa12.66□□□□□ -0.38
VAMP4-204ENST00000482519 TBPP20226 339 aa12.66□□□□□ -0.38
VAMP4-204ENST00000482519 PPP5CP53041 499 aa12.66□□□□□ -0.38
VAMP4-204ENST00000482519 TAS2R19P59542 299 aa12.66□□□□□ -0.38
VAMP4-204ENST00000482519 CTRB2Q6GPI1 263 aa12.66□□□□□ -0.38
VAMP4-204ENST00000482519 TMEM229BQ8NBD8 167 aa12.66□□□□□ -0.38
VAMP4-204ENST00000482519 ISOC1Q96CN7 298 aa12.66□□□□□ -0.38
VAMP4-204ENST00000482519 FANCD2OSQ96PS1 177 aa12.66□□□□□ -0.38
VAMP4-204ENST00000482519 OR51B2Q9Y5P1 312 aa12.66□□□□□ -0.38
VAMP4-204ENST00000482519 IGLC7A0M8Q6 106 aa12.65□□□□□ -0.38
VAMP4-204ENST00000482519 RAB3DO95716 219 aa12.65□□□□□ -0.38
VAMP4-204ENST00000482519 HLA-AP01891 365 aaKnown RBP12.65□□□□□ -0.38
VAMP4-204ENST00000482519 SERPINE2P07093 398 aa12.65□□□□□ -0.38
VAMP4-204ENST00000482519 OR13C7P0DN81 318 aa12.65□□□□□ -0.38
VAMP4-204ENST00000482519 GP9P14770 177 aa12.65□□□□□ -0.38
VAMP4-204ENST00000482519 HIST1H1BP16401 226 aaKnown RBP12.65□□□□□ -0.38
VAMP4-204ENST00000482519 STEAP1BQ6NZ63 245 aa12.65□□□□□ -0.38
VAMP4-204ENST00000482519 CLEC19AQ6UXS0 136 aa12.65□□□□□ -0.38
VAMP4-204ENST00000482519 ARRDC1Q8N5I2 433 aa12.65□□□□□ -0.38
VAMP4-204ENST00000482519 OR1L8Q8NGR8 309 aa12.65□□□□□ -0.38
VAMP4-204ENST00000482519 EEF1AKMT3Q96AZ1 226 aa12.65□□□□□ -0.38
VAMP4-204ENST00000482519 COL7A1Q02388 2944 aa12.65□□□□□ -0.38
VAMP4-204ENST00000482519 MECP2P51608 486 aaKnown RBP12.64□□□□□ -0.39
VAMP4-204ENST00000482519 PIGPP57054 158 aa12.64□□□□□ -0.39
VAMP4-204ENST00000482519 MRPS10P82664 201 aaKnown RBP12.64□□□□□ -0.39
VAMP4-204ENST00000482519 C11orf87Q6NUJ2 197 aa12.64□□□□□ -0.39
VAMP4-204ENST00000482519 FAAP20Q6NZ36 180 aa12.64□□□□□ -0.39
VAMP4-204ENST00000482519 IL34Q6ZMJ4 242 aa12.64□□□□□ -0.39
VAMP4-204ENST00000482519 LHFPL1Q86WI0 220 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms