RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 FOXL1Q12952 345 aa12.66□□□□□ -0.38
C9orf3-218ENST00000482056 CT45A1Q5HYN5 189 aa12.66□□□□□ -0.38
C9orf3-218ENST00000482056 OR4A47Q6IF82 309 aa12.66□□□□□ -0.38
C9orf3-218ENST00000482056 SEM1Q6ZVN7 128 aa12.66□□□□□ -0.38
C9orf3-218ENST00000482056 CT45A3Q8NHU0 189 aa12.66□□□□□ -0.38
C9orf3-218ENST00000482056 TMEM18Q96B42 140 aa12.66□□□□□ -0.38
C9orf3-218ENST00000482056 SFRP2Q96HF1 295 aa12.66□□□□□ -0.38
C9orf3-218ENST00000482056 PRNDQ9UKY0 176 aa12.66□□□□□ -0.38
C9orf3-218ENST00000482056 MUC3AQ02505 3323 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 TET2Q6N021 2002 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-218ENST00000482056 IGLV3-9A0A075B6K5 115 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 A0A0U1RQK1 487 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 ZNF320A2RRD8 509 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 GCGP01275 180 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 TNFSF4P23510 183 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 SSMEM1Q8WWF3 244 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 UHRF2Q96PU4 802 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 SFXN3Q9BWM7 321 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 IL3RAP26951 378 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 GCHFRP30047 84 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 CCKARP32238 428 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 RPL29P47914 159 aaKnown RBP12.65□□□□□ -0.38
C9orf3-218ENST00000482056 CNN1P51911 297 aaKnown RBP12.65□□□□□ -0.38
C9orf3-218ENST00000482056 TNFAIP6P98066 277 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-218ENST00000482056 IGF2-ASQ6U949 168 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 LYG1Q8N1E2 194 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 LEAP2Q969E1 77 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 DERL1Q9BUN8 251 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 IDI2-AS1Q9NZ38 188 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 TP53TG5Q9Y2B4 290 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 TRAPPC1Q9Y5R8 145 aa12.65□□□□□ -0.38
C9orf3-218ENST00000482056 POU2AF1Q16633 256 aa12.64□□□□□ -0.39
C9orf3-218ENST00000482056 SPRNQ5BIV9 151 aa12.64□□□□□ -0.39
C9orf3-218ENST00000482056 ARSJQ5FYB0 599 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-218ENST00000482056 C1orf185Q5T7R7 199 aa12.64□□□□□ -0.39
C9orf3-218ENST00000482056 ZNF474Q6S9Z5 364 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-218ENST00000482056 TMEM144Q7Z5S9 345 aa12.64□□□□□ -0.39
C9orf3-218ENST00000482056 STPG3Q8N7X2 389 aa12.64□□□□□ -0.39
C9orf3-218ENST00000482056 IL19Q9UHD0 177 aa12.64□□□□□ -0.39
C9orf3-218ENST00000482056 OR51B2Q9Y5P1 312 aa12.64□□□□□ -0.39
C9orf3-218ENST00000482056 BDP1A6H8Y1 2624 aa12.64□□□□□ -0.39
C9orf3-218ENST00000482056 FRYQ5TBA9 3013 aa12.64□□□□□ -0.39
C9orf3-218ENST00000482056 SCO2A0A1W2PP80 73 aa12.63□□□□□ -0.39
C9orf3-218ENST00000482056 TM4SF5O14894 197 aa12.63□□□□□ -0.39
C9orf3-218ENST00000482056 CA2P00918 260 aa12.63□□□□□ -0.39
C9orf3-218ENST00000482056 C1QTNF9P0C862 333 aa12.63□□□□□ -0.39
C9orf3-218ENST00000482056 DDTP30046 118 aa12.63□□□□□ -0.39
C9orf3-218ENST00000482056 ATP5IP56385 69 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-218ENST00000482056 EFNB3Q15768 340 aa12.63□□□□□ -0.39
C9orf3-218ENST00000482056 RTL8BQ17RB0 113 aa12.63□□□□□ -0.39
C9orf3-218ENST00000482056 STUMQ69YW2 141 aa12.63□□□□□ -0.39
C9orf3-218ENST00000482056 TANC2Q9HCD6 1990 aa12.63□□□□□ -0.39
C9orf3-218ENST00000482056 IRF2P14316 349 aa12.63□□□□□ -0.39
C9orf3-218ENST00000482056 OR10G8Q8NGN5 311 aa12.63□□□□□ -0.39
C9orf3-218ENST00000482056 SGMS2Q8NHU3 365 aa12.63□□□□□ -0.39
C9orf3-218ENST00000482056 HINT2Q9BX68 163 aa12.63□□□□□ -0.39
C9orf3-218ENST00000482056 PLEKHA3Q9HB20 300 aa12.63□□□□□ -0.39
C9orf3-218ENST00000482056 ZNF257Q9Y2Q1 563 aa12.63□□□□□ -0.39
C9orf3-218ENST00000482056 TRAV9-1A0A075B6T8 112 aa12.62□□□□□ -0.39
C9orf3-218ENST00000482056 A8MXE2 369 aa12.62□□□□□ -0.39
C9orf3-218ENST00000482056 GZMBP10144 247 aa12.62□□□□□ -0.39
C9orf3-218ENST00000482056 SELLP14151 372 aa12.62□□□□□ -0.39
C9orf3-218ENST00000482056 GPX4P36969 197 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-218ENST00000482056 IGFL3Q6UXB1 125 aa12.62□□□□□ -0.39
C9orf3-218ENST00000482056 C1orf229Q6ZS94 237 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-218ENST00000482056 LINC00469Q8N7U9 141 aa12.62□□□□□ -0.39
C9orf3-218ENST00000482056 ZNF439Q8NDP4 499 aa12.62□□□□□ -0.39
C9orf3-218ENST00000482056 GCM1Q9NP62 436 aa12.62□□□□□ -0.39
C9orf3-218ENST00000482056 AURKAIP1Q9NWT8 199 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-218ENST00000482056 ARL2-SNX15V9GYD0 113 aa12.62□□□□□ -0.39
C9orf3-218ENST00000482056 TIMP3P35625 211 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 RPL15P61313 204 aaKnown RBP12.61□□□□□ -0.39
C9orf3-218ENST00000482056 FAM201AQ5SY85 155 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 REC114Q7Z4M0 266 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 NEUROG1Q92886 237 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 GAFA1Q96PS6 74 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 PRO1933Q9H354 126 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 FKBP11Q9NYL4 201 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 SLC25A10Q9UBX3 287 aaPredicted RBP12.61□□□□□ -0.39
C9orf3-218ENST00000482056 YTHDF2Q9Y5A9 579 aaKnown RBP12.61□□□□□ -0.39
C9orf3-218ENST00000482056 LY96Q9Y6Y9 160 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 DSCAML1Q8TD84 2053 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 A0A087X0M5 115 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 A0A1B0GX30 115 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 J3QR06 171 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 IGHV1-46P01743 117 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 GNG10P50151 68 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 PRCDQ00LT1 54 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 MRPL41Q8IXM3 137 aaKnown RBP12.61□□□□□ -0.39
C9orf3-218ENST00000482056 ZNF114Q8NC26 417 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 C11orf52Q96A22 123 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 C1orf159Q96HA4 380 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 NOL4LQ96MY1 436 aaPredicted RBP12.61□□□□□ -0.39
C9orf3-218ENST00000482056 LINC00574Q9H8X3 128 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 TMEM167BQ9NRX6 74 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 ELOVL5Q9NYP7 299 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 SLC45A2Q9UMX9 530 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 FAM215AQ9Y5M1 114 aa12.61□□□□□ -0.39
C9orf3-218ENST00000482056 PRRC2CQ9Y520 2896 aaKnown RBP12.61□□□□□ -0.39
C9orf3-218ENST00000482056 PGPEP1LA6NFU8 196 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms