RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 HSD17B11Q8NBQ5 300 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 OR10A7Q8NGE5 316 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 LEAP2Q969E1 77 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 C10orf35Q96D05 121 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 LINC01600Q96MT4 127 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 MCHR1Q99705 422 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 NIPSNAP3BQ9BS92 247 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 COPS4Q9BT78 406 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 C1orf50Q9BV19 199 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 OSBPL10Q9BXB5 764 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 CHST6Q9GZX3 395 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 PARP12Q9H0J9 701 aaKnown RBP1.26□□□□□ -2.21
USH2A-204ENST00000481786 SLC2A9Q9NRM0 540 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 CYTL1Q9NRR1 136 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 ARGLU1Q9NWB6 273 aaPredicted RBP1.26□□□□□ -2.21
USH2A-204ENST00000481786 ZNF586Q9NXT0 402 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 IDI2-AS1Q9NZ38 188 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 MRPL27Q9P0M9 148 aaKnown RBP1.26□□□□□ -2.21
USH2A-204ENST00000481786 TMEM216Q9P0N5 145 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 SAMD4AQ9UPU9 718 aaKnown RBP1.26□□□□□ -2.21
USH2A-204ENST00000481786 MED31Q9Y3C7 131 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 N6AMT1Q9Y5N5 214 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 PUS1Q9Y606 427 aaKnown RBP eCLIP1.26□□□□□ -2.21
USH2A-204ENST00000481786 U3KQV3 271 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 V9GYQ6 96 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 GPR98Q8WXG9 6306 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 USH2AO75445 5202 aa1.26□□□□□ -2.21
USH2A-204ENST00000481786 IGHV1OR15-1A0A075B7D0 117 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 TRBV2A0A0J9YWF9 115 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 A0A0J9YXY3 114 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 SPRR5A0A1B0GTR4 108 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 SMIM9A6NGZ8 99 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 CPSF4LA6NMK7 179 aaKnown RBP1.25□□□□□ -2.21
USH2A-204ENST00000481786 ZNF878C9JN71 531 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 E9PBE3 544 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 FCN1O00602 326 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 SDHDO14521 159 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 RFXANKO14593 260 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 SNAI2O43623 268 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 IGLV2-23P01705 113 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 IGFBP3P17936 291 aaPredicted RBP1.25□□□□□ -2.21
USH2A-204ENST00000481786 GALP22466 123 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 HTR1FP30939 366 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 PYCR1P32322 319 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 S100A3P33764 101 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 CTRLP40313 264 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 VHLP40337 213 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 CDKN2CP42773 168 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 CX3CR1P49238 355 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 CRISP1P54107 249 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 DNAJB13P59910 316 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 RPL8P62917 257 aaKnown RBP1.25□□□□□ -2.21
USH2A-204ENST00000481786 GRB2P62993 217 aaKnown RBP1.25□□□□□ -2.21
USH2A-204ENST00000481786 ATP5G2Q06055 141 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 FADDQ13158 208 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 KRR1Q13601 381 aaKnown RBP1.25□□□□□ -2.21
USH2A-204ENST00000481786 PLGLAQ15195 96 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 RGNQ15493 299 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 Q3ZCU0 254 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 GLT8D1Q68CQ7 371 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 REEP3Q6NUK4 255 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 FAM159AQ6UWV7 190 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 SLC25A48Q6ZT89 311 aaKnown RBP1.25□□□□□ -2.21
USH2A-204ENST00000481786 FAM122BQ7Z309 247 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 OAFQ86UD1 273 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 Q8IYB0 196 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 CNPY4Q8N129 248 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 LINC00471Q8N535 108 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 C20orf203Q8NBC4 194 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 OR5T1Q8NG75 326 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 OR51A7Q8NH64 312 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 PFN4Q8NHR9 129 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 KCNG3Q8TAE7 436 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 FAM81AQ8TBF8 368 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 TWIST2Q8WVJ9 160 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 TMEM239Q8WW34 195 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 GHSRQ92847 366 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 RBPMSQ93062 196 aaKnown RBP1.25□□□□□ -2.21
USH2A-204ENST00000481786 MAL2Q969L2 176 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 TMEM101Q96IK0 257 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 CEP19Q96LK0 163 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 Q96M85 177 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 NAPGQ99747 312 aaPredicted RBP1.25□□□□□ -2.21
USH2A-204ENST00000481786 TXN2Q99757 166 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 FAM103A1Q9BTL3 118 aaKnown RBP1.25□□□□□ -2.21
USH2A-204ENST00000481786 CHAC1Q9BUX1 264 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 PKIBQ9C010 78 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 POLR2J2Q9GZM3 115 aaKnown RBP1.25□□□□□ -2.21
USH2A-204ENST00000481786 NSRP1Q9H0G5 558 aaKnown RBP1.25□□□□□ -2.21
USH2A-204ENST00000481786 POLR2J3Q9H1A7 115 aaKnown RBP1.25□□□□□ -2.21
USH2A-204ENST00000481786 NCOR1P1Q9H4R4 102 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 GORASP2Q9H8Y8 452 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 ROPN1Q9HAT0 212 aaPredicted RBP1.25□□□□□ -2.21
USH2A-204ENST00000481786 TPT1P8Q9HAU6 139 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 SMPD3Q9NY59 655 aaPredicted RBP1.25□□□□□ -2.21
USH2A-204ENST00000481786 CALYQ9NYX4 217 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 ZNF230Q9UIE0 474 aaPredicted RBP1.25□□□□□ -2.21
USH2A-204ENST00000481786 RIMS3Q9UJD0 308 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 UFC1Q9Y3C8 167 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 FIS1Q9Y3D6 152 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms