RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 IFNA21P01568 189 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 HLA-DRB1P01911 266 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 OPN1MWP04001 364 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 OPN1MW2P0DN77 364 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 OPN1MW3P0DN78 364 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 SLC25A6P12236 298 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 GNB1P62873 340 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 BLCAPP62952 87 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 UBA52P62987 128 aaKnown RBP7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 SRSF4Q08170 494 aaKnown RBP7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 PLGLAQ15195 96 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 TNXAQ16473 311 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 TMEM95Q3KNT9 176 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 GSG1LQ6UXU4 331 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 C19orf35Q6ZS72 473 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 TMEM86BQ8N661 226 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 OR4A5Q8NH83 315 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 VSTM2AQ8TAG5 236 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 C2orf50Q96LR7 162 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 FAM103A1Q9BTL3 118 aaKnown RBP7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 ZNF436Q9C0F3 470 aaPredicted RBP7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 COA4Q9NYJ1 87 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 PITPNC1Q9UKF7 332 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 RCL1Q9Y2P8 373 aaKnown RBP7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 POMT1Q9Y6A1 747 aa7.09□□□□□ -1.27
NUDCD3-208ENST00000480209 C2CD3Q4AC94 2353 aa7.09□□□□□ -1.28
NUDCD3-208ENST00000480209 TRAV14DV4A0A0A6YYC5 116 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 TEX50A0A1B0GTY4 177 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 BTBD17A6NE02 478 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 TEX22C9J3V5 150 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 H0YIZ8 118 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 SMLR1H3BR10 107 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 CLDN34H7C241 214 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 ATG12O94817 140 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 MBPP02686 304 aaPredicted RBP7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 RNASE1P07998 156 aaKnown RBP7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 TRAPPC2P0DI81 140 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 TRAPPC2BP0DI82 140 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 EGR2P11161 476 aaPredicted RBP7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 COMPP49747 757 aaPredicted RBP7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 RPL8P62917 257 aaKnown RBP7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 CX3CL1P78423 397 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 CD83Q01151 205 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 RAB32Q13637 225 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 Q5BKY6 102 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 ASPHD1Q5U4P2 390 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 C16orf82Q7Z2V1 217 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 ZNF429Q86V71 674 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 MMD2Q8IY49 270 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 OR10W1Q8NGF6 305 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 OR4A16Q8NH70 328 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 OR1S1Q8NH92 325 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 ST6GAL2Q96JF0 529 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 FYTTD1Q96QD9 318 aaKnown RBP7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 MAGT1Q9H0U3 335 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 C11orf1Q9H5F2 150 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 ZNF702PQ9H963 129 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 RANGRFQ9HD47 186 aaPredicted RBP7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 GSKIPQ9P0R6 139 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 HSPB7Q9UBY9 170 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 OR51B2Q9Y5P1 312 aa7.08□□□□□ -1.28
NUDCD3-208ENST00000480209 IGLC7A0M8Q6 106 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 FAM181BA6NEQ2 426 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 K7EPK0 472 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 ATP6V0E1O15342 81 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 RBMXL2O75526 392 aaKnown RBP7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 SNAPC5O75971 98 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 TMEM50AO95807 157 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 SCGB1D2O95969 90 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 FGF2P09038 288 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 GIPP09681 153 aaPredicted RBP7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 APELAP0DMC3 54 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 RPL27AP46776 148 aaKnown RBP7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 POLR2GP62487 172 aaKnown RBP eCLIP7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 PRCDQ00LT1 54 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 ID3Q02535 119 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 TNFRSF9Q07011 255 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 SCGB2A2Q13296 93 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 LRRC37A5PQ49AS3 106 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 PDLIM3Q53GG5 364 aaPredicted RBP7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 C19orf54Q5BKX5 351 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 THOC7Q6I9Y2 204 aaKnown RBP7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 RBMS3Q6XE24 437 aaKnown RBP7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 GRPEL2Q8TAA5 225 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 ZNF418Q8TF45 676 aaPredicted RBP7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 SRSF12Q8WXF0 261 aaKnown RBP7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 ARPC1AQ92747 370 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 SPIN2AQ99865 258 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 RASL11BQ9BPW5 248 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 SPIN2BQ9BPZ2 258 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 NEURL2Q9BR09 285 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 AIFM2Q9BRQ8 373 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 PDCD10Q9BUL8 212 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 NMES1Q9C002 83 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 RBKSQ9H477 322 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 NDUFA4L2Q9NRX3 87 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 C1RLQ9NZP8 487 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 PRNDQ9UKY0 176 aa7.07□□□□□ -1.28
NUDCD3-208ENST00000480209 PIGBOS1A0A0B4J2F0 54 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms