RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 NPIPB5A8MRT5 1133 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 YIF1AO95070 293 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 PPYP01298 95 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 CRYGBP07316 175 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 IGKV1-13P0DP09 117 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 FGF9P31371 208 aaPredicted RBP5.38□□□□□ -1.55
COL17A1-205ENST00000480127 GPR183P32249 361 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 TAS2R46P59540 309 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 Q56UQ5 140 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 SLC25A24Q6NUK1 477 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 CROCCP3Q8IVE0 287 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 LAX1Q8IWV1 398 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 TTC9CQ8N5M4 171 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 DEFB125Q8N687 156 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 GVQW1Q8N7I0 195 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 SAMD12Q8N8I0 201 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 OR4A5Q8NH83 315 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 DDB2Q92466 427 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 C5orf30Q96GV9 206 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 GPHA2Q96T91 129 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 C20orf24Q9BUV8 137 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 RETNQ9HD89 108 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 CCL28Q9NRJ3 127 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 SLC2A9Q9NRM0 540 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 UFC1Q9Y3C8 167 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 IZUMO1RA6ND01 250 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 CXorf65A6NEN9 183 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 C2orf70A6NJV1 201 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 HPRT1P00492 218 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 PMP2P02689 132 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 RLN1P04808 185 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 CLEC3BP05452 202 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 EIF4EP06730 217 aaKnown RBP5.37□□□□□ -1.55
COL17A1-205ENST00000480127 CLEC2LP0C7M8 214 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 OR13C7P0DN81 318 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 PTHLHP12272 177 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 MYOD1P15172 320 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 AREGP15514 252 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 PSMB6P28072 239 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 SCAND1P57086 179 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 TAS2R31P59538 309 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 LSM3P62310 102 aaKnown RBP5.37□□□□□ -1.55
COL17A1-205ENST00000480127 RPL30P62888 115 aaKnown RBP5.37□□□□□ -1.55
COL17A1-205ENST00000480127 ZNF45Q02386 682 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 ZNF585BQ52M93 769 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 UBE2NLQ5JXB2 153 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 LAMTOR1Q6IAA8 161 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 BTNL8Q6UX41 500 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 C19orf35Q6ZS72 473 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 UXS1Q8NBZ7 420 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 ZBTB34Q8NCN2 500 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 OR5AP2Q8NGF4 316 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 OR1L6Q8NGR2 347 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 RNASE11Q8TAA1 199 aaKnown RBP5.37□□□□□ -1.55
COL17A1-205ENST00000480127 TMEM167AQ8TBQ9 72 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 CACNG8Q8WXS5 425 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 WDR89Q96FK6 387 aaPredicted RBP5.37□□□□□ -1.55
COL17A1-205ENST00000480127 ZNF2Q9BSG1 426 aaPredicted RBP5.37□□□□□ -1.55
COL17A1-205ENST00000480127 QTRT1Q9BXR0 403 aaKnown RBP5.37□□□□□ -1.55
COL17A1-205ENST00000480127 C6orf62Q9GZU0 229 aaPredicted RBP5.37□□□□□ -1.55
COL17A1-205ENST00000480127 AUNIPQ9H7T9 357 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 TMEM140Q9NV12 185 aa5.37□□□□□ -1.55
COL17A1-205ENST00000480127 TRBV9A0A0B4J1U6 114 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 OR2T8A6NH00 312 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 SSX5O60225 188 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 S1PR2O95136 353 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 NDUFB8O95169 186 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 BRI3O95415 125 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 KRASP01116 189 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 IL6RP08887 468 aaPredicted RBP5.36□□□□□ -1.55
COL17A1-205ENST00000480127 CD7P09564 240 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 TRAPPC2P0DI81 140 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 TRAPPC2BP0DI82 140 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 PGAM2P15259 253 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 CBLN1P23435 193 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 PRSS3P35030 304 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 SSBP2P81877 361 aaPredicted RBP5.36□□□□□ -1.55
COL17A1-205ENST00000480127 DEFB114Q30KQ6 69 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 ZNF818PQ6ZRF7 136 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 HSD17B13Q7Z5P4 300 aaPredicted RBP5.36□□□□□ -1.55
COL17A1-205ENST00000480127 NR2C2APQ86WQ0 139 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 HOGA1Q86XE5 327 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 OR1L8Q8NGR8 309 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 OR5H6Q8NGV6 325 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 OR6F1Q8NGZ6 308 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 OR4A16Q8NH70 328 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 TMEM56Q96MV1 263 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 CMTM3Q96MX0 182 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 PDCD10Q9BUL8 212 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 WFDC10AQ9H1F0 79 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 RNF167Q9H6Y7 350 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 BET1LQ9NYM9 111 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 SIGLEC8Q9NYZ4 499 aa5.36□□□□□ -1.55
COL17A1-205ENST00000480127 HERC2O95714 4834 aa5.35□□□□□ -1.55
COL17A1-205ENST00000480127 LOC102724200A0A096LPH7 203 aaPredicted RBP5.35□□□□□ -1.55
COL17A1-205ENST00000480127 IGHV3-21A0A0B4J1V1 117 aa5.35□□□□□ -1.55
COL17A1-205ENST00000480127 MFSD2BA6NFX1 497 aa5.35□□□□□ -1.55
COL17A1-205ENST00000480127 MARCH11A6NNE9 402 aa5.35□□□□□ -1.55
COL17A1-205ENST00000480127 FAM25AB3EWG3 89 aa5.35□□□□□ -1.55
COL17A1-205ENST00000480127 FAM25CB3EWG5 89 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms