RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ZADH2Q8N4Q0 377 aa20.27■□□□□ 0.84
SYNGAP1-206ENST00000479510 ITLN1Q8WWA0 313 aa20.27■□□□□ 0.84
SYNGAP1-206ENST00000479510 TMEM37Q8WXS4 190 aa20.27■□□□□ 0.84
SYNGAP1-206ENST00000479510 RNF7Q9UBF6 113 aa20.27■□□□□ 0.84
SYNGAP1-206ENST00000479510 LY96Q9Y6Y9 160 aa20.27■□□□□ 0.84
SYNGAP1-206ENST00000479510 SAA2-SAA4A0A096LPE2 208 aa20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 MKRN2OSH3BPM6 223 aa20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 SAA2P0DJI9 122 aaPredicted RBP20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 DDTP30046 118 aa20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 GPX4P36969 197 aaPredicted RBP20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 C1orf159Q96HA4 380 aa20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 PRNDQ9UKY0 176 aa20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 HCFC1P51610 2035 aa20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 GCHFRP30047 84 aa20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 CNN1P51911 297 aaKnown RBP20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 ARSJQ5FYB0 599 aaPredicted RBP20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 REC114Q7Z4M0 266 aa20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 ZNF439Q8NDP4 499 aa20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 C11orf52Q96A22 123 aa20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 DERL1Q9BUN8 251 aa20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 ZNF257Q9Y2Q1 563 aa20.26■□□□□ 0.83
SYNGAP1-206ENST00000479510 MRPS11P82912 194 aaKnown RBP20.25■□□□□ 0.83
SYNGAP1-206ENST00000479510 OR5T1Q8NG75 326 aa20.25■□□□□ 0.83
SYNGAP1-206ENST00000479510 EFNB3Q15768 340 aa20.25■□□□□ 0.83
SYNGAP1-206ENST00000479510 CLEC12BQ2HXU8 276 aa20.25■□□□□ 0.83
SYNGAP1-206ENST00000479510 DEFB109BQ30KR1 87 aa20.25■□□□□ 0.83
SYNGAP1-206ENST00000479510 C1orf229Q6ZS94 237 aaPredicted RBP20.25■□□□□ 0.83
SYNGAP1-206ENST00000479510 STPG3Q8N7X2 389 aa20.25■□□□□ 0.83
SYNGAP1-206ENST00000479510 IDI2-AS1Q9NZ38 188 aa20.25■□□□□ 0.83
SYNGAP1-206ENST00000479510 A0A0U1RQK1 487 aa20.24■□□□□ 0.83
SYNGAP1-206ENST00000479510 ZNF320A2RRD8 509 aa20.24■□□□□ 0.83
SYNGAP1-206ENST00000479510 TM4SF5O14894 197 aa20.24■□□□□ 0.83
SYNGAP1-206ENST00000479510 SPRY3O43610 288 aa20.24■□□□□ 0.83
SYNGAP1-206ENST00000479510 C1QTNF9P0C862 333 aa20.24■□□□□ 0.83
SYNGAP1-206ENST00000479510 AREGP15514 252 aa20.24■□□□□ 0.83
SYNGAP1-206ENST00000479510 SELENOVP59797 346 aa20.24■□□□□ 0.83
SYNGAP1-206ENST00000479510 SPRNQ5BIV9 151 aa20.24■□□□□ 0.83
SYNGAP1-206ENST00000479510 STUMQ69YW2 141 aa20.24■□□□□ 0.83
SYNGAP1-206ENST00000479510 ZNF474Q6S9Z5 364 aaPredicted RBP20.24■□□□□ 0.83
SYNGAP1-206ENST00000479510 IGFL3Q6UXB1 125 aa20.24■□□□□ 0.83
SYNGAP1-206ENST00000479510 DEFB124Q8NES8 71 aa20.24■□□□□ 0.83
SYNGAP1-206ENST00000479510 NEUROG1Q92886 237 aa20.24■□□□□ 0.83
SYNGAP1-206ENST00000479510 C14orf144Q96I85 54 aa20.24■□□□□ 0.83
SYNGAP1-206ENST00000479510 NOL4LQ96MY1 436 aaPredicted RBP20.23■□□□□ 0.83
SYNGAP1-206ENST00000479510 ELOVL5Q9NYP7 299 aa20.23■□□□□ 0.83
SYNGAP1-206ENST00000479510 SLC25A10Q9UBX3 287 aaPredicted RBP20.23■□□□□ 0.83
SYNGAP1-206ENST00000479510 IL19Q9UHD0 177 aa20.23■□□□□ 0.83
SYNGAP1-206ENST00000479510 TRAPPC1Q9Y5R8 145 aa20.23■□□□□ 0.83
SYNGAP1-206ENST00000479510 C9JCJ5 164 aa20.23■□□□□ 0.83
SYNGAP1-206ENST00000479510 PRR20EP86478 221 aa20.23■□□□□ 0.83
SYNGAP1-206ENST00000479510 PRR20CP86479 221 aa20.23■□□□□ 0.83
SYNGAP1-206ENST00000479510 PRR20DP86480 221 aa20.23■□□□□ 0.83
SYNGAP1-206ENST00000479510 PRR20BP86481 221 aa20.23■□□□□ 0.83
SYNGAP1-206ENST00000479510 PRR20AP86496 221 aa20.23■□□□□ 0.83
SYNGAP1-206ENST00000479510 ZNF114Q8NC26 417 aa20.23■□□□□ 0.83
SYNGAP1-206ENST00000479510 UHRF2Q96PU4 802 aa20.23■□□□□ 0.83
SYNGAP1-206ENST00000479510 TRBV20OR9-2A0A075B6H5 130 aa20.22■□□□□ 0.83
SYNGAP1-206ENST00000479510 CA2P00918 260 aa20.22■□□□□ 0.83
SYNGAP1-206ENST00000479510 OR10G8Q8NGN5 311 aa20.22■□□□□ 0.83
SYNGAP1-206ENST00000479510 SGMS2Q8NHU3 365 aa20.22■□□□□ 0.83
SYNGAP1-206ENST00000479510 SCO2A0A1W2PP80 73 aa20.22■□□□□ 0.83
SYNGAP1-206ENST00000479510 IGHV3-7P01780 117 aa20.22■□□□□ 0.83
SYNGAP1-206ENST00000479510 TIMP3P35625 211 aa20.22■□□□□ 0.83
SYNGAP1-206ENST00000479510 YPEL3P61236 119 aaPredicted RBP20.22■□□□□ 0.83
SYNGAP1-206ENST00000479510 TEX38Q6PEX7 206 aa20.22■□□□□ 0.83
SYNGAP1-206ENST00000479510 SSMEM1Q8WWF3 244 aa20.22■□□□□ 0.83
SYNGAP1-206ENST00000479510 YTHDF2Q9Y5A9 579 aaKnown RBP20.22■□□□□ 0.83
SYNGAP1-206ENST00000479510 OR51B2Q9Y5P1 312 aa20.22■□□□□ 0.83
SYNGAP1-206ENST00000479510 INTS1Q8N201 2190 aaKnown RBP20.21■□□□□ 0.83
SYNGAP1-206ENST00000479510 A0A087X0M5 115 aa20.21■□□□□ 0.83
SYNGAP1-206ENST00000479510 A0A1B0GX30 115 aa20.21■□□□□ 0.83
SYNGAP1-206ENST00000479510 GBGT1Q8N5D6 347 aa20.21■□□□□ 0.83
SYNGAP1-206ENST00000479510 GCM1Q9NP62 436 aa20.21■□□□□ 0.83
SYNGAP1-206ENST00000479510 BMP5P22003 454 aa20.2■□□□□ 0.82
SYNGAP1-206ENST00000479510 TNFSF4P23510 183 aa20.2■□□□□ 0.82
SYNGAP1-206ENST00000479510 PRCDQ00LT1 54 aa20.2■□□□□ 0.82
SYNGAP1-206ENST00000479510 C1orf185Q5T7R7 199 aa20.2■□□□□ 0.82
SYNGAP1-206ENST00000479510 LYG1Q8N1E2 194 aa20.2■□□□□ 0.82
SYNGAP1-206ENST00000479510 URB1O60287 2271 aaKnown RBP20.2■□□□□ 0.82
SYNGAP1-206ENST00000479510 SPAARA0A1B0GVQ0 90 aa20.2■□□□□ 0.82
SYNGAP1-206ENST00000479510 SSX2Q16385 188 aa20.2■□□□□ 0.82
SYNGAP1-206ENST00000479510 OCC1Q8TAD7 63 aa20.2■□□□□ 0.82
SYNGAP1-206ENST00000479510 GAFA1Q96PS6 74 aa20.2■□□□□ 0.82
SYNGAP1-206ENST00000479510 FKBP11Q9NYL4 201 aa20.2■□□□□ 0.82
SYNGAP1-206ENST00000479510 HEATR1Q9H583 2144 aaKnown RBP20.2■□□□□ 0.82
SYNGAP1-206ENST00000479510 TNFAIP6P98066 277 aaPredicted RBP20.19■□□□□ 0.82
SYNGAP1-206ENST00000479510 ZNF788Q6ZQV5 615 aa20.19■□□□□ 0.82
SYNGAP1-206ENST00000479510 LEAP2Q969E1 77 aa20.19■□□□□ 0.82
SYNGAP1-206ENST00000479510 SLC35E1Q96K37 410 aa20.19■□□□□ 0.82
SYNGAP1-206ENST00000479510 C19orf24Q9BVV8 132 aa20.19■□□□□ 0.82
SYNGAP1-206ENST00000479510 SEPSECSQ9HD40 501 aaKnown RBP20.19■□□□□ 0.82
SYNGAP1-206ENST00000479510 FAM215AQ9Y5M1 114 aa20.19■□□□□ 0.82
SYNGAP1-206ENST00000479510 PRR14LQ5THK1 2151 aa20.19■□□□□ 0.82
SYNGAP1-206ENST00000479510 UPK2O00526 184 aa20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 SELLP14151 372 aa20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 RPL31P62899 125 aaKnown RBP20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 RTL8BQ17RB0 113 aa20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 SLC25A48Q6ZT89 311 aaKnown RBP20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 TCF23Q7RTU1 214 aa20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 PNKDQ8N490 385 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms