RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 A8MWL6 223 aa12.09□□□□□ -0.47
COL20A1-206ENST00000479501 SNRPCP09234 159 aaKnown RBP12.09□□□□□ -0.47
COL20A1-206ENST00000479501 APELAP0DMC3 54 aa12.09□□□□□ -0.47
COL20A1-206ENST00000479501 BIVMQ86UB2 503 aa12.09□□□□□ -0.47
COL20A1-206ENST00000479501 OR13A1Q8NGR1 328 aa12.09□□□□□ -0.47
COL20A1-206ENST00000479501 QTRT1Q9BXR0 403 aaKnown RBP12.09□□□□□ -0.47
COL20A1-206ENST00000479501 CADP27708 2225 aa12.09□□□□□ -0.47
COL20A1-206ENST00000479501 SRP19P09132 144 aaKnown RBP12.09□□□□□ -0.47
COL20A1-206ENST00000479501 CFPP27918 469 aa12.09□□□□□ -0.47
COL20A1-206ENST00000479501 F8VVB4 439 aa12.09□□□□□ -0.47
COL20A1-206ENST00000479501 F8VWA3 439 aa12.09□□□□□ -0.47
COL20A1-206ENST00000479501 RPL7P18124 248 aaKnown RBP12.09□□□□□ -0.47
COL20A1-206ENST00000479501 RTP5Q14D33 572 aa12.09□□□□□ -0.47
COL20A1-206ENST00000479501 VKORC1L1Q8N0U8 176 aa12.09□□□□□ -0.47
COL20A1-206ENST00000479501 MC5RP33032 325 aa12.08□□□□□ -0.48
COL20A1-206ENST00000479501 COMPP49747 757 aaPredicted RBP12.08□□□□□ -0.48
COL20A1-206ENST00000479501 RPL8P62917 257 aaKnown RBP12.08□□□□□ -0.48
COL20A1-206ENST00000479501 MIC13Q5XKP0 118 aa12.08□□□□□ -0.48
COL20A1-206ENST00000479501 ABHD12Q8N2K0 398 aa12.08□□□□□ -0.48
COL20A1-206ENST00000479501 RCC1LQ96I51 464 aaKnown RBP12.08□□□□□ -0.48
COL20A1-206ENST00000479501 C18orf12Q96KH6 178 aa12.08□□□□□ -0.48
COL20A1-206ENST00000479501 PSMG3Q9BT73 122 aaPredicted RBP12.08□□□□□ -0.48
COL20A1-206ENST00000479501 OR2T8A6NH00 312 aa12.08□□□□□ -0.48
COL20A1-206ENST00000479501 CA2P00918 260 aa12.08□□□□□ -0.48
COL20A1-206ENST00000479501 SRIP30626 198 aa12.08□□□□□ -0.48
COL20A1-206ENST00000479501 FOXL2NBQ6ZUU3 175 aa12.08□□□□□ -0.48
COL20A1-206ENST00000479501 DCTN5Q9BTE1 182 aa12.08□□□□□ -0.48
COL20A1-206ENST00000479501 COL25A1Q9BXS0 654 aaPredicted RBP12.08□□□□□ -0.48
COL20A1-206ENST00000479501 LRRK1Q38SD2 2015 aa12.08□□□□□ -0.48
COL20A1-206ENST00000479501 IGHV3-72A0A0B4J1Y9 119 aa12.08□□□□□ -0.48
COL20A1-206ENST00000479501 LEPROTL1O95214 131 aa12.08□□□□□ -0.48
COL20A1-206ENST00000479501 EGR1P18146 543 aa12.08□□□□□ -0.48
COL20A1-206ENST00000479501 TCTAP57738 103 aa12.08□□□□□ -0.48
COL20A1-206ENST00000479501 Q8WTZ3 238 aa12.08□□□□□ -0.48
COL20A1-206ENST00000479501 C17orf98A8MV24 154 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 UQCRFS1P47985 274 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 NMUP48645 174 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 PLP1P60201 277 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 MMDQ15546 238 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 FAM201AQ5SY85 155 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 TMEM42Q69YG0 159 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 SLC25A34Q6PIV7 304 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 FAM216AQ8WUB2 273 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 DPF1Q92782 380 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 SPSB4Q96A44 273 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 NDUFA2O43678 99 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 ATOH7Q8N100 152 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 CD40P25942 277 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 RELBQ01201 579 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 PQLC2Q6ZP29 291 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 PERPQ96FX8 193 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 ZFP30Q9Y2G7 519 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 WNK2Q9Y3S1 2297 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 RPL27AP46776 148 aaKnown RBP12.07□□□□□ -0.48
COL20A1-206ENST00000479501 RPL39P5Q59GN2 51 aa12.07□□□□□ -0.48
COL20A1-206ENST00000479501 COL4A4P53420 1690 aaPredicted RBP12.06□□□□□ -0.48
COL20A1-206ENST00000479501 C5orf52A6NGY3 159 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 UBE2CO00762 179 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 SRSF9Q13242 221 aaKnown RBP eCLIP12.06□□□□□ -0.48
COL20A1-206ENST00000479501 PAXXQ9BUH6 204 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 UFC1Q9Y3C8 167 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 FGF16O43320 207 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 CBLN1P23435 193 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 LRTM2Q8N967 370 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 SLC25A33Q9BSK2 321 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 NDUFAF3Q9BU61 184 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 ASCL3Q9NQ33 180 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 A0A087WWC5 75 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.06□□□□□ -0.48
COL20A1-206ENST00000479501 C19orf67A6NJJ6 358 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 GNG7O60262 68 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 IL18BPO95998 194 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 FXYD3Q14802 87 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 CYP2G1PQ6ZSU1 146 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 MMD2Q8IY49 270 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 ABHD17AQ96GS6 310 aa12.06□□□□□ -0.48
COL20A1-206ENST00000479501 RBM14Q96PK6 669 aaKnown RBP12.06□□□□□ -0.48
COL20A1-206ENST00000479501 CEACAM18A8MTB9 384 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 CSRP1P21291 193 aaKnown RBP12.05□□□□□ -0.48
COL20A1-206ENST00000479501 TMEM30BQ3MIR4 351 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 BDP1A6H8Y1 2624 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 TMSB15BA0A087X1C1 80 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 E9PLN8 166 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 PSMB2P49721 201 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 TMPRSS3P57727 454 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 ZNF497Q6ZNH5 498 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 RASL11BQ9BPW5 248 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 C1RLQ9NZP8 487 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 F5H697 171 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 ORM1P02763 201 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 STAG3L2P0CL84 134 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 LCN2P80188 198 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 ID3Q02535 119 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 ZNF124Q15973 351 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 DOLPP1Q86YN1 238 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 MDS2Q8NDY4 140 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 ELOVL5Q9NYP7 299 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 ABCA4P78363 2273 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 VENTXO95231 258 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 FOLR2P14207 255 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms