RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 MBD3L1Q8WWY6 194 aa7.98□□□□□ -1.13
RAD51B-208ENST00000479335 PBDC1Q9BVG4 233 aa7.98□□□□□ -1.13
RAD51B-208ENST00000479335 SEC11CQ9BY50 192 aa7.98□□□□□ -1.13
RAD51B-208ENST00000479335 TREM1Q9NP99 234 aa7.98□□□□□ -1.13
RAD51B-208ENST00000479335 ONECUT1Q9UBC0 465 aa7.98□□□□□ -1.13
RAD51B-208ENST00000479335 FBXO7Q9Y3I1 522 aa7.98□□□□□ -1.13
RAD51B-208ENST00000479335 KPTNQ9Y664 436 aa7.98□□□□□ -1.13
RAD51B-208ENST00000479335 HRNRQ86YZ3 2850 aaPredicted RBP7.98□□□□□ -1.13
RAD51B-208ENST00000479335 CFAP46Q8IYW2 2715 aa7.98□□□□□ -1.13
RAD51B-208ENST00000479335 TET2Q6N021 2002 aaPredicted RBP7.97□□□□□ -1.13
RAD51B-208ENST00000479335 CACNA1BQ00975 2339 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 IGHV1-3A0A0C4DH29 117 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 UBE2L5PA0A1B0GUS4 154 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 PRSS46E5RG02 174 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 C17orf112F2Z3M2 114 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 ENSAO43768 121 aaKnown RBP7.97□□□□□ -1.13
RAD51B-208ENST00000479335 C1QL1O75973 258 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 IGLV2-23P01705 113 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 IGHV2-5P01817 119 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 NPY1RP25929 384 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 CD1BP29016 333 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 CEACAM3P40198 252 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 REG1BP48304 166 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 FHITP49789 147 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 PMS2P11Q13670 270 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 DIAPH2-AS1Q14236 149 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 SPINK9Q5DT21 86 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 ZNF709Q8N972 641 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 SLC24A4Q8NFF2 622 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 OR4P4Q8NGL7 312 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 RBMXL1Q96E39 390 aaKnown RBP7.97□□□□□ -1.13
RAD51B-208ENST00000479335 RSG1Q9BU20 258 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 COMMD5Q9GZQ3 224 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 PLEKHA3Q9HB20 300 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 NPVFQ9HCQ7 196 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 NDUFA4L2Q9NRX3 87 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 WDR83OSQ9Y284 106 aa7.97□□□□□ -1.13
RAD51B-208ENST00000479335 USP24Q9UPU5 2620 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 A0A1W2PN81 502 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 OOSP1A8MZH6 123 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 RRHO14718 337 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 NDUFS7O75251 213 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 HTR1DP28221 377 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 MAS1LP35410 378 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 CHRNA7P36544 502 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 PDLIM4P50479 330 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 ARF6P62330 175 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 ERHP84090 104 aaKnown RBP7.96□□□□□ -1.13
RAD51B-208ENST00000479335 GUK1Q16774 197 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 BSXQ3C1V8 233 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 C2orf83Q53S99 150 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 TMEM41BQ5BJD5 291 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 SPSB3Q6PJ21 355 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 ZNF843Q8N446 348 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 PNKDQ8N490 385 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 RPEQ96AT9 228 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 NARS2Q96I59 477 aaKnown RBP7.96□□□□□ -1.13
RAD51B-208ENST00000479335 BBC3Q96PG8 261 aaPredicted RBP7.96□□□□□ -1.13
RAD51B-208ENST00000479335 SCRT1Q9BWW7 348 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 RPRMQ9NS64 109 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 KIAA1456Q9P272 454 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 DPM3Q9P2X0 92 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 CARHSP1Q9Y2V2 147 aaKnown RBP7.96□□□□□ -1.13
RAD51B-208ENST00000479335 RFNGQ9Y644 331 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 LRBAP50851 2863 aa7.96□□□□□ -1.13
RAD51B-208ENST00000479335 ODF3BA8MYP8 253 aa7.96□□□□□ -1.14
RAD51B-208ENST00000479335 NDUFS8O00217 210 aa7.96□□□□□ -1.14
RAD51B-208ENST00000479335 APOC3P02656 99 aa7.96□□□□□ -1.14
RAD51B-208ENST00000479335 IFNA4P05014 189 aa7.96□□□□□ -1.14
RAD51B-208ENST00000479335 M6PRP20645 277 aa7.96□□□□□ -1.14
RAD51B-208ENST00000479335 FGF7P21781 194 aa7.96□□□□□ -1.14
RAD51B-208ENST00000479335 SRSF3P84103 164 aaKnown RBP7.96□□□□□ -1.14
RAD51B-208ENST00000479335 PAX2Q02962 417 aa7.96□□□□□ -1.14
RAD51B-208ENST00000479335 TPTE2P1Q5T6R2 138 aa7.96□□□□□ -1.14
RAD51B-208ENST00000479335 MRPL41Q8IXM3 137 aaKnown RBP7.96□□□□□ -1.14
RAD51B-208ENST00000479335 MMD2Q8IY49 270 aa7.96□□□□□ -1.14
RAD51B-208ENST00000479335 TMEM170AQ8WVE7 144 aa7.96□□□□□ -1.14
RAD51B-208ENST00000479335 POLR3KQ9Y2Y1 108 aaPredicted RBP7.96□□□□□ -1.14
RAD51B-208ENST00000479335 RELNP78509 3460 aa7.95□□□□□ -1.14
RAD51B-208ENST00000479335 SMG1Q96Q15 3661 aaKnown RBP7.95□□□□□ -1.14
RAD51B-208ENST00000479335 F8W036 122 aa7.95□□□□□ -1.14
RAD51B-208ENST00000479335 AGPAT2O15120 278 aa7.95□□□□□ -1.14
RAD51B-208ENST00000479335 CA2P00918 260 aa7.95□□□□□ -1.14
RAD51B-208ENST00000479335 CRYGBP07316 175 aa7.95□□□□□ -1.14
RAD51B-208ENST00000479335 COX7A1P24310 79 aa7.95□□□□□ -1.14
RAD51B-208ENST00000479335 LMO4P61968 165 aa7.95□□□□□ -1.14
RAD51B-208ENST00000479335 HABP2Q14520 560 aaPredicted RBP7.95□□□□□ -1.14
RAD51B-208ENST00000479335 MINOS1Q5TGZ0 78 aa7.95□□□□□ -1.14
RAD51B-208ENST00000479335 MOB3BQ86TA1 216 aa7.95□□□□□ -1.14
RAD51B-208ENST00000479335 SVBPQ8N300 66 aa7.95□□□□□ -1.14
RAD51B-208ENST00000479335 SFT2D1Q8WV19 159 aa7.95□□□□□ -1.14
RAD51B-208ENST00000479335 NPCDR1Q9BY65 106 aa7.95□□□□□ -1.14
RAD51B-208ENST00000479335 KCNIP2Q9NS61 270 aa7.95□□□□□ -1.14
RAD51B-208ENST00000479335 MINOS1-NBL1R4GNA1 71 aa7.95□□□□□ -1.14
RAD51B-208ENST00000479335 DOPEY1Q5JWR5 2465 aa7.94□□□□□ -1.14
RAD51B-208ENST00000479335 RBFOX3A6NFN3 312 aa7.94□□□□□ -1.14
RAD51B-208ENST00000479335 FAM157AC9JC47 383 aa7.94□□□□□ -1.14
RAD51B-208ENST00000479335 FOXH1O75593 365 aa7.94□□□□□ -1.14
RAD51B-208ENST00000479335 IGHV4-39P01824 125 aa7.94□□□□□ -1.14
RAD51B-208ENST00000479335 OPRK1P41145 380 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms