RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 C2orf50Q96LR7 162 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 C11orf1Q9H5F2 150 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 COA4Q9NYJ1 87 aa10.37□□□□□ -0.75
CHD3-210ENST00000479080 SETD2Q9BYW2 2564 aaPredicted RBP10.37□□□□□ -0.75
CHD3-210ENST00000479080 TRAV14DV4A0A0A6YYC5 116 aa10.36□□□□□ -0.75
CHD3-210ENST00000479080 TEX50A0A1B0GTY4 177 aa10.36□□□□□ -0.75
CHD3-210ENST00000479080 C5orf51A6NDU8 294 aa10.36□□□□□ -0.75
CHD3-210ENST00000479080 TEX22C9J3V5 150 aa10.36□□□□□ -0.75
CHD3-210ENST00000479080 H0YIZ8 118 aa10.36□□□□□ -0.75
CHD3-210ENST00000479080 ATG12O94817 140 aa10.36□□□□□ -0.75
CHD3-210ENST00000479080 IFNA21P01568 189 aa10.36□□□□□ -0.75
CHD3-210ENST00000479080 RPL8P62917 257 aaKnown RBP10.36□□□□□ -0.75
CHD3-210ENST00000479080 CX3CL1P78423 397 aa10.36□□□□□ -0.75
CHD3-210ENST00000479080 SPINK9Q5DT21 86 aa10.36□□□□□ -0.75
CHD3-210ENST00000479080 ASPHD1Q5U4P2 390 aa10.36□□□□□ -0.75
CHD3-210ENST00000479080 GSG1LQ6UXU4 331 aa10.36□□□□□ -0.75
CHD3-210ENST00000479080 C16orf82Q7Z2V1 217 aa10.36□□□□□ -0.75
CHD3-210ENST00000479080 ZNF429Q86V71 674 aa10.36□□□□□ -0.75
CHD3-210ENST00000479080 VSTM2AQ8TAG5 236 aa10.36□□□□□ -0.75
CHD3-210ENST00000479080 FYTTD1Q96QD9 318 aaKnown RBP10.36□□□□□ -0.75
CHD3-210ENST00000479080 NEURL2Q9BR09 285 aa10.36□□□□□ -0.75
CHD3-210ENST00000479080 ZNF436Q9C0F3 470 aaPredicted RBP10.36□□□□□ -0.75
CHD3-210ENST00000479080 RCL1Q9Y2P8 373 aaKnown RBP10.36□□□□□ -0.75
CHD3-210ENST00000479080 CLDN34H7C241 214 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 TMEM50AO95807 157 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 MBPP02686 304 aaPredicted RBP10.35□□□□□ -0.75
CHD3-210ENST00000479080 OPN1MWP04001 364 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 FGF2P09038 288 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 OPN1MW2P0DN77 364 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 OPN1MW3P0DN78 364 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 COMPP49747 757 aaPredicted RBP10.35□□□□□ -0.75
CHD3-210ENST00000479080 UBA52P62987 128 aaKnown RBP10.35□□□□□ -0.75
CHD3-210ENST00000479080 CD83Q01151 205 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 ID3Q02535 119 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 PDLIM3Q53GG5 364 aaPredicted RBP10.35□□□□□ -0.75
CHD3-210ENST00000479080 C19orf35Q6ZS72 473 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 MMD2Q8IY49 270 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 ZNF702PQ9H963 129 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 RANGRFQ9HD47 186 aaPredicted RBP10.35□□□□□ -0.75
CHD3-210ENST00000479080 C1RLQ9NZP8 487 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 KIAA1456Q9P272 454 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 HSPB7Q9UBY9 170 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 PITPNC1Q9UKF7 332 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 OR51B2Q9Y5P1 312 aa10.35□□□□□ -0.75
CHD3-210ENST00000479080 TET2Q6N021 2002 aaPredicted RBP10.34□□□□□ -0.75
CHD3-210ENST00000479080 SMLR1H3BR10 107 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 K7EPK0 472 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 RNASE1P07998 156 aaKnown RBP10.34□□□□□ -0.75
CHD3-210ENST00000479080 GIPP09681 153 aaPredicted RBP10.34□□□□□ -0.75
CHD3-210ENST00000479080 VDAC2P45880 294 aaPredicted RBP10.34□□□□□ -0.75
CHD3-210ENST00000479080 HSPE1P61604 102 aaKnown RBP10.34□□□□□ -0.75
CHD3-210ENST00000479080 POLR2GP62487 172 aaKnown RBP eCLIP10.34□□□□□ -0.75
CHD3-210ENST00000479080 TNFRSF9Q07011 255 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 RAB32Q13637 225 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 TNXAQ16473 311 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 TMEM95Q3KNT9 176 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 C19orf54Q5BKX5 351 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 OR10W1Q8NGF6 305 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 OR4A16Q8NH70 328 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 OR1S1Q8NH92 325 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 SPIN2AQ99865 258 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 SPIN2BQ9BPZ2 258 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 AIFM2Q9BRQ8 373 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 FAM103A1Q9BTL3 118 aaKnown RBP10.34□□□□□ -0.75
CHD3-210ENST00000479080 NMES1Q9C002 83 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 MAGT1Q9H0U3 335 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 RBKSQ9H477 322 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 NDUFA4L2Q9NRX3 87 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.34□□□□□ -0.75
CHD3-210ENST00000479080 GSKIPQ9P0R6 139 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 PRNDQ9UKY0 176 aa10.34□□□□□ -0.75
CHD3-210ENST00000479080 IGLC7A0M8Q6 106 aa10.33□□□□□ -0.76
CHD3-210ENST00000479080 BTBD17A6NE02 478 aa10.33□□□□□ -0.76
CHD3-210ENST00000479080 RPL27AP46776 148 aaKnown RBP10.33□□□□□ -0.76
CHD3-210ENST00000479080 PAX9P55771 341 aa10.33□□□□□ -0.76
CHD3-210ENST00000479080 GNB1P62873 340 aa10.33□□□□□ -0.76
CHD3-210ENST00000479080 PRCDQ00LT1 54 aa10.33□□□□□ -0.76
CHD3-210ENST00000479080 PLGLAQ15195 96 aa10.33□□□□□ -0.76
CHD3-210ENST00000479080 THOC7Q6I9Y2 204 aaKnown RBP10.33□□□□□ -0.76
CHD3-210ENST00000479080 ZNF562Q6V9R5 426 aa10.33□□□□□ -0.76
CHD3-210ENST00000479080 OR52E5Q8NH55 327 aa10.33□□□□□ -0.76
CHD3-210ENST00000479080 ZNF418Q8TF45 676 aaPredicted RBP10.33□□□□□ -0.76
CHD3-210ENST00000479080 TMEM170AQ8WVE7 144 aa10.33□□□□□ -0.76
CHD3-210ENST00000479080 PPP1R1CQ8WVI7 109 aa10.33□□□□□ -0.76
CHD3-210ENST00000479080 SRSF12Q8WXF0 261 aaKnown RBP10.33□□□□□ -0.76
CHD3-210ENST00000479080 RASL11BQ9BPW5 248 aa10.33□□□□□ -0.76
CHD3-210ENST00000479080 OR5AC2Q9NZP5 309 aa10.33□□□□□ -0.76
CHD3-210ENST00000479080 ZNF257Q9Y2Q1 563 aa10.33□□□□□ -0.76
CHD3-210ENST00000479080 TNCP24821 2201 aa10.33□□□□□ -0.76
CHD3-210ENST00000479080 FAM181BA6NEQ2 426 aa10.32□□□□□ -0.76
CHD3-210ENST00000479080 ATP6V0E1O15342 81 aa10.32□□□□□ -0.76
CHD3-210ENST00000479080 PLXNB1O43157 2135 aa10.32□□□□□ -0.76
CHD3-210ENST00000479080 SNAPC5O75971 98 aa10.32□□□□□ -0.76
CHD3-210ENST00000479080 SCGB1D2O95969 90 aa10.32□□□□□ -0.76
CHD3-210ENST00000479080 IGHG2P01859 326 aa10.32□□□□□ -0.76
CHD3-210ENST00000479080 AREGP15514 252 aa10.32□□□□□ -0.76
CHD3-210ENST00000479080 MAS1LP35410 378 aa10.32□□□□□ -0.76
CHD3-210ENST00000479080 NKX2-1P43699 371 aaPredicted RBP10.32□□□□□ -0.76
CHD3-210ENST00000479080 CRIP2P52943 208 aaPredicted RBP10.32□□□□□ -0.76
CHD3-210ENST00000479080 WT1-ASQ06250 92 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms