RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 UBE2V1Q13404 147 aa11.77□□□□□ -0.53
CCDC78-210ENST00000478979 MRPL49Q13405 166 aaKnown RBP11.77□□□□□ -0.53
CCDC78-210ENST00000478979 C1orf174Q8IYL3 243 aa11.77□□□□□ -0.53
CCDC78-210ENST00000478979 LSM10Q969L4 123 aaKnown RBP11.77□□□□□ -0.53
CCDC78-210ENST00000478979 SH2D1BO14796 132 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 HYPMO75409 117 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 HAND1O96004 215 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 TGFBR3Q03167 851 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 UNQ5815/PRO19632Q6UWF5 114 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 RNF2Q99496 336 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 GP6Q9HCN6 339 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 LOC105371242A0A075B767 164 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 TIMM8AO60220 97 aaPredicted RBP11.76□□□□□ -0.53
CCDC78-210ENST00000478979 KITLGP21583 273 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 SSTR5P35346 364 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 TFF3Q07654 80 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 ATP6V1FQ16864 119 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 VHLLQ6RSH7 139 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 SIGLECL1Q8N7X8 197 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 STARD4Q96DR4 205 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 DUSP13Q9UII6 198 aa11.76□□□□□ -0.53
CCDC78-210ENST00000478979 TPRP12270 2363 aaKnown RBP11.76□□□□□ -0.53
CCDC78-210ENST00000478979 IGLC2P0DOY2 106 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 IGLC3P0DOY3 106 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 COX5AP20674 150 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 ZNF585BQ52M93 769 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 Q6ZR03 302 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 ANKRD11Q6UB99 2663 aaPredicted RBP11.75□□□□□ -0.53
CCDC78-210ENST00000478979 LRP5LA4QPB2 252 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 F6UZH7 168 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 THBS3P49746 956 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 ZNF90Q03938 601 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 SRSF7Q16629 238 aaKnown RBP eCLIP11.75□□□□□ -0.53
CCDC78-210ENST00000478979 TMEM14EPQ6UXP3 125 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 ZNF497Q6ZNH5 498 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 C9orf106Q8NAJ2 232 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 PKIBQ9C010 78 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 ZNF586Q9NXT0 402 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 POLDIP2Q9Y2S7 368 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 TRBV20OR9-2A0A075B6H5 130 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 GMPPAQ96IJ6 420 aaPredicted RBP11.75□□□□□ -0.53
CCDC78-210ENST00000478979 CLN8Q9UBY8 286 aa11.75□□□□□ -0.53
CCDC78-210ENST00000478979 PDE6DO43924 150 aa11.74□□□□□ -0.53
CCDC78-210ENST00000478979 HINT1P49773 126 aaPredicted RBP11.74□□□□□ -0.53
CCDC78-210ENST00000478979 RPL30P62888 115 aaKnown RBP11.74□□□□□ -0.53
CCDC78-210ENST00000478979 DEFB109BQ30KR1 87 aa11.74□□□□□ -0.53
CCDC78-210ENST00000478979 FAM214BQ7L5A3 538 aa11.74□□□□□ -0.53
CCDC78-210ENST00000478979 FGFRL1Q8N441 504 aa11.74□□□□□ -0.53
CCDC78-210ENST00000478979 C12orf77C9JDV5 145 aa11.74□□□□□ -0.53
CCDC78-210ENST00000478979 TOMM40O96008 361 aa11.74□□□□□ -0.53
CCDC78-210ENST00000478979 FRMD6-AS1P0C7T7 363 aa11.74□□□□□ -0.53
CCDC78-210ENST00000478979 GABRA6Q16445 453 aa11.74□□□□□ -0.53
CCDC78-210ENST00000478979 LRFN3Q9BTN0 628 aa11.74□□□□□ -0.53
CCDC78-210ENST00000478979 TBL2Q9Y4P3 447 aaKnown RBP11.74□□□□□ -0.53
CCDC78-210ENST00000478979 COX11Q9Y6N1 276 aa11.74□□□□□ -0.53
CCDC78-210ENST00000478979 ARFGEF3Q5TH69 2177 aa11.74□□□□□ -0.53
CCDC78-210ENST00000478979 PIGBOS1A0A0B4J2F0 54 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 FCN1O00602 326 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 GPX1P07203 203 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 CDC34P49427 236 aaPredicted RBP11.73□□□□□ -0.53
CCDC78-210ENST00000478979 ZDHHC16Q969W1 377 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 TMEM147Q9BVK8 224 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 KCNIP1Q9NZI2 227 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 KRTCAP3Q53RY4 240 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 ZNF738Q8NE65 137 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 OR10G8Q8NGN5 311 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 NPCDR1Q9BY65 106 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 NBASA2RRP1 2371 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 IGHV3OR15-7A0A075B7D8 119 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 HBZP02008 142 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 TIMP3P35625 211 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 IER3P46695 156 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 NINJ1Q92982 152 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 NRN1Q9NPD7 142 aa11.73□□□□□ -0.53
CCDC78-210ENST00000478979 SLC17A3O00476 420 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 S1PR2O95136 353 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 Q0VG73 95 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 LINC00596Q86U02 117 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 GALMQ96C23 342 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 C5orf30Q96GV9 206 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 TMEM204Q9BSN7 226 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 GNB4Q9HAV0 340 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 LIN7CQ9NUP9 197 aaKnown RBP11.72□□□□□ -0.53
CCDC78-210ENST00000478979 ZNF292O60281 2723 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 CECR9P0C854 216 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 RAC2P15153 192 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 AMTP48728 403 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 ERVK11-1P61568 191 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 OR2Z1Q8NG97 314 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 WNT10AQ9GZT5 417 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 PSG11Q9UQ72 335 aa11.72□□□□□ -0.53
CCDC78-210ENST00000478979 RELNP78509 3460 aa11.71□□□□□ -0.53
CCDC78-210ENST00000478979 C17orf98A8MV24 154 aa11.71□□□□□ -0.53
CCDC78-210ENST00000478979 SNURFLB1AK76 121 aa11.71□□□□□ -0.53
CCDC78-210ENST00000478979 PMCHP20382 165 aa11.71□□□□□ -0.53
CCDC78-210ENST00000478979 KIR2DL2P43627 348 aaPredicted RBP11.71□□□□□ -0.53
CCDC78-210ENST00000478979 GCSAMLQ5JQS6 135 aa11.71□□□□□ -0.53
CCDC78-210ENST00000478979 OR4C5Q8NGB2 326 aa11.71□□□□□ -0.53
CCDC78-210ENST00000478979 GSX1Q9H4S2 264 aaPredicted RBP11.71□□□□□ -0.53
CCDC78-210ENST00000478979 KCNIP2Q9NS61 270 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms