RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 TWIST2Q8WVJ9 160 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 SECTM1Q8WVN6 248 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 ZNRF4Q8WWF5 429 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 IGFBPL1Q8WX77 278 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 SLC25A28Q96A46 364 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 Q96MF0 132 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 DERL3Q96Q80 235 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 PMCHL2Q9BQD1 86 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 PYGO2Q9BRQ0 406 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 ABHD6Q9BV23 337 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 NPFFR1Q9GZQ6 430 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 EIF5A2Q9GZV4 153 aaKnown RBP4.96□□□□□ -1.62
TRA2B-211ENST00000477939 TMEM133Q9H2Q1 129 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 KCNK15Q9H427 330 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 MAP1LC3AQ9H492 121 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 CA10Q9NS85 328 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 ZNF226Q9NYT6 803 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 THYN1Q9P016 225 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 KLHL13Q9P2N7 655 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 KCNS2Q9ULS6 477 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 B9D1Q9UPM9 204 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 LSM2Q9Y333 95 aaKnown RBP4.96□□□□□ -1.62
TRA2B-211ENST00000477939 PAM16Q9Y3D7 125 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 IER3IP1Q9Y5U9 82 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 COL6A5A8TX70 2615 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 STAB1Q9NY15 2570 aa4.96□□□□□ -1.62
TRA2B-211ENST00000477939 A0A1B0GUS0 222 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.95□□□□□ -1.62
TRA2B-211ENST00000477939 DUXBA0A1W2PPF3 345 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 SH2D7A6NKC9 451 aaPredicted RBP4.95□□□□□ -1.62
TRA2B-211ENST00000477939 ZNF785A8K8V0 405 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 F8W1H4 67 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 FXYD1O00168 92 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 F2RL2O00254 374 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 GEMIN2O14893 280 aaKnown RBP4.95□□□□□ -1.62
TRA2B-211ENST00000477939 YPEL1O60688 119 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 SS18L1O75177 396 aaPredicted RBP4.95□□□□□ -1.62
TRA2B-211ENST00000477939 NPIPB7O75200 414 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 HYPMO75409 117 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 GCM2O75603 506 aaPredicted RBP4.95□□□□□ -1.62
TRA2B-211ENST00000477939 HLA-HP01893 362 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 GAPDHP04406 335 aaKnown RBP4.95□□□□□ -1.62
TRA2B-211ENST00000477939 HSPB1P04792 205 aaKnown RBP4.95□□□□□ -1.62
TRA2B-211ENST00000477939 CRYGDP07320 174 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 CXCL1P09341 107 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 IFI6P09912 130 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 SPINK8P0C7L1 97 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 FAM106CPP0CH98 169 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 ELK1P19419 428 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 MALP21145 153 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 HINT1P49773 126 aaPredicted RBP4.95□□□□□ -1.62
TRA2B-211ENST00000477939 CRISP3P54108 245 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 PSG9Q00887 426 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 SSBP1Q04837 148 aaKnown RBP4.95□□□□□ -1.62
TRA2B-211ENST00000477939 KLRD1Q13241 179 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 KIAA0040Q15053 153 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 DUSP5Q16690 384 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 TBC1D28Q2M2D7 210 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 LRRC75BQ2VPJ9 315 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 NRN1LQ496H8 165 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 FAM106AQ4KMX7 169 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 UBE2NLQ5JXB2 153 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 AADACL3Q5VUY0 350 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 ANKRD34AQ69YU3 496 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 SLC18B1Q6NT16 456 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 NOXRED1Q6NXP6 359 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 GLIPR1L1Q6UWM5 242 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 STAC2Q6ZMT1 411 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 C20orf204Q6ZNR8 217 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 C8orf86Q6ZUL3 223 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 FAM214BQ7L5A3 538 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 ZAR1Q86SH2 424 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 PRIMA1Q86XR5 153 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 OSR2Q8N2R0 312 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 ZNF709Q8N972 641 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 BOLLQ8N9W6 283 aaKnown RBP4.95□□□□□ -1.62
TRA2B-211ENST00000477939 OR10S1Q8NGN2 331 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 OR52P1PQ8NH57 321 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 OR10D3Q8NH80 312 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 OR51E1Q8TCB6 317 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 TMED6Q8WW62 240 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 DDIT4LQ96D03 193 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 YPEL2Q96QA6 119 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 GGTLC1Q9BX51 225 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 REEP1Q9H902 201 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 ST20Q9HBF5 79 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 GPATCH2Q9NW75 528 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 DUSP13Q9UII6 198 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 AK3Q9UIJ7 227 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 PROCRQ9UNN8 238 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 ABCA1O95477 2261 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 PLCE1Q9P212 2302 aa4.95□□□□□ -1.62
TRA2B-211ENST00000477939 CR1P17927 2039 aa4.94□□□□□ -1.62
TRA2B-211ENST00000477939 NUP214P35658 2090 aaPredicted RBP4.94□□□□□ -1.62
TRA2B-211ENST00000477939 TRBV6-7A0A0A0MS04 114 aa4.94□□□□□ -1.62
TRA2B-211ENST00000477939 TINCRA0A1B0GVN0 87 aa4.94□□□□□ -1.62
TRA2B-211ENST00000477939 TMEM129A0AVI4 362 aa4.94□□□□□ -1.62
TRA2B-211ENST00000477939 NPIPB5A8MRT5 1133 aa4.94□□□□□ -1.62
TRA2B-211ENST00000477939 TEX22C9J3V5 150 aa4.94□□□□□ -1.62
TRA2B-211ENST00000477939 TMEM262E9PQX1 116 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms