RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 RHOBP62745 196 aa14.92□□□□□ -0.02
CCM2-209ENST00000477605 POU2AF1Q16633 256 aa14.92□□□□□ -0.02
CCM2-209ENST00000477605 TMEM30BQ3MIR4 351 aa14.92□□□□□ -0.02
CCM2-209ENST00000477605 MIC13Q5XKP0 118 aa14.92□□□□□ -0.02
CCM2-209ENST00000477605 TEPPQ6URK8 271 aa14.92□□□□□ -0.02
CCM2-209ENST00000477605 OPN3Q9H1Y3 402 aaPredicted RBP14.92□□□□□ -0.02
CCM2-209ENST00000477605 PTPRBP23467 1997 aa14.92□□□□□ -0.02
CCM2-209ENST00000477605 A0A0U1RQK1 487 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 ZNF320A2RRD8 509 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 MBD3L4A6NDZ8 208 aaPredicted RBP14.91□□□□□ -0.02
CCM2-209ENST00000477605 MBD3L3A6NE82 208 aaPredicted RBP14.91□□□□□ -0.02
CCM2-209ENST00000477605 MBD3L5A6NJ08 208 aaPredicted RBP14.91□□□□□ -0.02
CCM2-209ENST00000477605 CLEC12BQ2HXU8 276 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 UNQ6494/PRO21346Q6UXR6 183 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 ABHD12Q8N2K0 398 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 OR5T1Q8NG75 326 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 MBD3L2Q8NHZ7 208 aaPredicted RBP14.91□□□□□ -0.02
CCM2-209ENST00000477605 TMEM14BQ9NUH8 114 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 DKK4Q9UBT3 224 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 TRAPPC1Q9Y5R8 145 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 IGF2RP11717 2491 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 IL6RP08887 468 aaPredicted RBP14.91□□□□□ -0.02
CCM2-209ENST00000477605 ATP5IP56385 69 aaPredicted RBP14.91□□□□□ -0.02
CCM2-209ENST00000477605 ZNF600Q6ZNG1 722 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 FAM222BQ8WU58 562 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 C11orf52Q96A22 123 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 OR2V2Q96R30 315 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 ENY2Q9NPA8 101 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 ELOVL5Q9NYP7 299 aa14.91□□□□□ -0.02
CCM2-209ENST00000477605 TRAV3A0A0B4J244 114 aa14.9□□□□□ -0.02
CCM2-209ENST00000477605 NPY1RP25929 384 aa14.9□□□□□ -0.02
CCM2-209ENST00000477605 GCHFRP30047 84 aa14.9□□□□□ -0.02
CCM2-209ENST00000477605 GLRXP35754 106 aa14.9□□□□□ -0.02
CCM2-209ENST00000477605 GATA4P43694 442 aa14.9□□□□□ -0.02
CCM2-209ENST00000477605 YPEL3P61236 119 aaPredicted RBP14.9□□□□□ -0.02
CCM2-209ENST00000477605 TIMM23BQ5SRD1 257 aa14.9□□□□□ -0.02
CCM2-209ENST00000477605 VKORC1L1Q8N0U8 176 aa14.9□□□□□ -0.02
CCM2-209ENST00000477605 GBGT1Q8N5D6 347 aa14.9□□□□□ -0.02
CCM2-209ENST00000477605 SLC24A4Q8NFF2 622 aa14.9□□□□□ -0.02
CCM2-209ENST00000477605 RHOVQ96L33 236 aa14.9□□□□□ -0.02
CCM2-209ENST00000477605 DERL1Q9BUN8 251 aa14.9□□□□□ -0.02
CCM2-209ENST00000477605 KBTBD11-OT1A0A1B0GTJ5 212 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 AREGP15514 252 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 KLF3P57682 345 aaPredicted RBP14.89□□□□□ -0.03
CCM2-209ENST00000477605 C17orf58Q2M2W7 97 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 BEND2Q8NDZ0 799 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 OR10G8Q8NGN5 311 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 C1orf159Q96HA4 380 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 UHRF2Q96PU4 802 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 FAM234AQ9H0X4 552 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 PRO1933Q9H354 126 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 KNTC1P50748 2209 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 A8MWP6 167 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 C9JCJ5 164 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 EFNB3Q15768 340 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 CT45A1Q5HYN5 189 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 MOGAT3Q86VF5 341 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 ZNRF1Q8ND25 227 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 CT45A3Q8NHU0 189 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 SGMS2Q8NHU3 365 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 SDSLQ96GA7 329 aa14.89□□□□□ -0.03
CCM2-209ENST00000477605 SLC25A10Q9UBX3 287 aaPredicted RBP14.89□□□□□ -0.03
CCM2-209ENST00000477605 USP24Q9UPU5 2620 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 IGHV3OR15-7A0A075B7D8 119 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 TIMP3P35625 211 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 SSTP61278 116 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 IQCJQ1A5X6 159 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 MSMPQ1L6U9 139 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 ARSJQ5FYB0 599 aaPredicted RBP14.88□□□□□ -0.03
CCM2-209ENST00000477605 OR4A47Q6IF82 309 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 LRP11Q86VZ4 500 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 ZNF114Q8NC26 417 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 PLPPR2Q96GM1 343 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 LINC00574Q9H8X3 128 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 PRNDQ9UKY0 176 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 ZNF257Q9Y2Q1 563 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 USF3Q68DE3 2245 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 TRBV20OR9-2A0A075B6H5 130 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 IGLV3-9A0A075B6K5 115 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 SSX2Q16385 188 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 TEX38Q6PEX7 206 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 STPG3Q8N7X2 389 aa14.88□□□□□ -0.03
CCM2-209ENST00000477605 TRGV10A0A0A0MS01 117 aa14.87□□□□□ -0.03
CCM2-209ENST00000477605 SCO2A0A1W2PP80 73 aa14.87□□□□□ -0.03
CCM2-209ENST00000477605 SLC31A2O15432 143 aa14.87□□□□□ -0.03
CCM2-209ENST00000477605 MRPS11P82912 194 aaKnown RBP14.87□□□□□ -0.03
CCM2-209ENST00000477605 PRR20EP86478 221 aa14.87□□□□□ -0.03
CCM2-209ENST00000477605 PRR20CP86479 221 aa14.87□□□□□ -0.03
CCM2-209ENST00000477605 PRR20DP86480 221 aa14.87□□□□□ -0.03
CCM2-209ENST00000477605 PRR20BP86481 221 aa14.87□□□□□ -0.03
CCM2-209ENST00000477605 PRR20AP86496 221 aa14.87□□□□□ -0.03
CCM2-209ENST00000477605 MRPL41Q8IXM3 137 aaKnown RBP14.87□□□□□ -0.03
CCM2-209ENST00000477605 ZNF664Q8N3J9 261 aa14.87□□□□□ -0.03
CCM2-209ENST00000477605 OCC1Q8TAD7 63 aa14.87□□□□□ -0.03
CCM2-209ENST00000477605 NEUROG1Q92886 237 aa14.87□□□□□ -0.03
CCM2-209ENST00000477605 YTHDF2Q9Y5A9 579 aaKnown RBP14.87□□□□□ -0.03
CCM2-209ENST00000477605 SAA2-SAA4A0A096LPE2 208 aa14.86□□□□□ -0.03
CCM2-209ENST00000477605 A8MXE2 369 aa14.86□□□□□ -0.03
CCM2-209ENST00000477605 SAA2P0DJI9 122 aaPredicted RBP14.86□□□□□ -0.03
CCM2-209ENST00000477605 ASCL3Q9NQ33 180 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms