RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 FOXF2Q12947 444 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 CR1LQ2VPA4 569 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 COL5A1-AS1Q5SY13 56 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 TEPPQ6URK8 271 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 SIGLECL1Q8N7X8 197 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 PPP1R35Q8TAP8 253 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 MRGPRDQ8TDS7 321 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 EAF1Q96JC9 268 aaPredicted RBP11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 HSPB9Q9BQS6 159 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 NCOR1P1Q9H4R4 102 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 C15orf65H3BRN8 121 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 FCN1O00602 326 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 TM4SF5O14894 197 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 GRPP07492 148 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 SP1P08047 785 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 TDGF1P13385 188 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 EGR1P18146 543 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 LINC00310P59036 64 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 PSG7Q13046 419 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 GCSAMLQ5JQS6 135 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 C11orf53Q8IXP5 236 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 MMD2Q8IY49 270 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 PNKDQ8N490 385 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 SAMD10Q9BYL1 202 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 SPRY4Q9C004 299 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 MS4A5Q9H3V2 200 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 FSCN3Q9NQT6 498 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 SLC45A2Q9UMX9 530 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 PSG11Q9UQ72 335 aa11.22□□□□□ -0.61
HLA-DMA-208ENST00000477541 IGF2RP11717 2491 aa11.21□□□□□ -0.61
HLA-DMA-208ENST00000477541 ZNHIT1O43257 154 aa11.21□□□□□ -0.61
HLA-DMA-208ENST00000477541 IL6RP08887 468 aaPredicted RBP11.21□□□□□ -0.61
HLA-DMA-208ENST00000477541 CBLN1P23435 193 aa11.21□□□□□ -0.61
HLA-DMA-208ENST00000477541 G0S2P27469 103 aa11.21□□□□□ -0.61
HLA-DMA-208ENST00000477541 CX3CL1P78423 397 aa11.21□□□□□ -0.61
HLA-DMA-208ENST00000477541 RELBQ01201 579 aa11.21□□□□□ -0.61
HLA-DMA-208ENST00000477541 EFNB3Q15768 340 aa11.21□□□□□ -0.61
HLA-DMA-208ENST00000477541 MIC13Q5XKP0 118 aa11.21□□□□□ -0.61
HLA-DMA-208ENST00000477541 RASL11AQ6T310 242 aa11.21□□□□□ -0.61
HLA-DMA-208ENST00000477541 TCF23Q7RTU1 214 aa11.21□□□□□ -0.61
HLA-DMA-208ENST00000477541 SLC35E1Q96K37 410 aa11.21□□□□□ -0.61
HLA-DMA-208ENST00000477541 OBP2BQ9NPH6 170 aa11.21□□□□□ -0.61
HLA-DMA-208ENST00000477541 YTHDF2Q9Y5A9 579 aaKnown RBP11.21□□□□□ -0.61
HLA-DMA-208ENST00000477541 HLA-DQA1P01909 254 aa11.21□□□□□ -0.62
HLA-DMA-208ENST00000477541 GPX1P07203 203 aa11.21□□□□□ -0.62
HLA-DMA-208ENST00000477541 RAB7AP51149 207 aa11.21□□□□□ -0.62
HLA-DMA-208ENST00000477541 CASP6P55212 293 aa11.21□□□□□ -0.62
HLA-DMA-208ENST00000477541 HLA-DRB5Q30154 266 aa11.21□□□□□ -0.62
HLA-DMA-208ENST00000477541 WDR82Q6UXN9 313 aa11.21□□□□□ -0.62
HLA-DMA-208ENST00000477541 OR13A1Q8NGR1 328 aa11.21□□□□□ -0.62
HLA-DMA-208ENST00000477541 OR4S2Q8NH73 311 aa11.21□□□□□ -0.62
HLA-DMA-208ENST00000477541 PLA2G3Q9NZ20 509 aa11.21□□□□□ -0.62
HLA-DMA-208ENST00000477541 IL19Q9UHD0 177 aa11.21□□□□□ -0.62
HLA-DMA-208ENST00000477541 FOXA2Q9Y261 457 aaPredicted RBP11.21□□□□□ -0.62
HLA-DMA-208ENST00000477541 V9GYV3 84 aa11.21□□□□□ -0.62
HLA-DMA-208ENST00000477541 DOCK11Q5JSL3 2073 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 SDK1Q7Z5N4 2213 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 GRIFINA4D1Z8 144 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 PGPEP1LA6NFU8 196 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 C15orf61A6NNL5 157 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 SNURFLB1AK76 121 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 K7EN84 100 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 ISLRO14498 428 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 FCGR3BO75015 233 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 IRF2P14316 349 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 MEOX1P50221 254 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 PRR20EP86478 221 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 PRR20CP86479 221 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 PRR20DP86480 221 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 PRR20BP86481 221 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 PRR20AP86496 221 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 C19orf35Q6ZS72 473 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 LRP11Q86VZ4 500 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 MDS2Q8NDY4 140 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 C1orf162Q8NEQ5 155 aaPredicted RBP11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 KLF14Q8TD94 323 aaPredicted RBP11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 KCNS1Q96KK3 526 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 WFIKKN1Q96NZ8 548 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 S1PR3Q99500 378 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 C12orf49Q9H741 205 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 LPAR2Q9HBW0 351 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 TCF19Q9Y242 345 aa11.2□□□□□ -0.62
HLA-DMA-208ENST00000477541 F2RL2O00254 374 aa11.19□□□□□ -0.62
HLA-DMA-208ENST00000477541 RRHO14718 337 aa11.19□□□□□ -0.62
HLA-DMA-208ENST00000477541 DEFA4P12838 97 aa11.19□□□□□ -0.62
HLA-DMA-208ENST00000477541 NPY1RP25929 384 aa11.19□□□□□ -0.62
HLA-DMA-208ENST00000477541 CEBPDP49716 269 aaPredicted RBP11.19□□□□□ -0.62
HLA-DMA-208ENST00000477541 GNG4P50150 75 aa11.19□□□□□ -0.62
HLA-DMA-208ENST00000477541 PQLC2Q6ZP29 291 aa11.19□□□□□ -0.62
HLA-DMA-208ENST00000477541 KLHDC1Q8N7A1 406 aa11.19□□□□□ -0.62
HLA-DMA-208ENST00000477541 STPG3Q8N7X2 389 aa11.19□□□□□ -0.62
HLA-DMA-208ENST00000477541 ADTRPQ96IZ2 230 aa11.19□□□□□ -0.62
HLA-DMA-208ENST00000477541 ENY2Q9NPA8 101 aa11.19□□□□□ -0.62
HLA-DMA-208ENST00000477541 AURKAIP1Q9NWT8 199 aaPredicted RBP11.19□□□□□ -0.62
HLA-DMA-208ENST00000477541 UQCR10Q9UDW1 63 aa11.19□□□□□ -0.62
HLA-DMA-208ENST00000477541 A0A1B0GUS0 222 aa11.18□□□□□ -0.62
HLA-DMA-208ENST00000477541 C20orf202A1L168 122 aa11.18□□□□□ -0.62
HLA-DMA-208ENST00000477541 C3orf80F5H4A9 247 aa11.18□□□□□ -0.62
HLA-DMA-208ENST00000477541 ZNF253O75346 499 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms