RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 KRTCAP3Q53RY4 240 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 KDF1Q8NAX2 398 aaPredicted RBP9.22□□□□□ -0.93
COL27A1-204ENST00000477421 CLDND2Q8NHS1 167 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 LYNX1G3V0Z9 82 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 CXorf1O96002 111 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 TRGC1P0CF51 173 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 LYNX1P0DP58 116 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 ICAM4Q14773 271 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 ZNF506Q5JVG8 444 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 PEAR1Q5VY43 1037 aaPredicted RBP9.22□□□□□ -0.93
COL27A1-204ENST00000477421 PCSK4Q6UW60 755 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 A0A1W2PN81 502 aa9.21□□□□□ -0.93
COL27A1-204ENST00000477421 WISP2O76076 250 aa9.21□□□□□ -0.93
COL27A1-204ENST00000477421 CA2P00918 260 aa9.21□□□□□ -0.93
COL27A1-204ENST00000477421 ATP5G3P48201 142 aa9.21□□□□□ -0.93
COL27A1-204ENST00000477421 MMDQ15546 238 aa9.21□□□□□ -0.93
COL27A1-204ENST00000477421 ASCL4Q6XD76 172 aa9.21□□□□□ -0.93
COL27A1-204ENST00000477421 VSTM2AQ8TAG5 236 aa9.21□□□□□ -0.93
COL27A1-204ENST00000477421 Q8WTZ3 238 aa9.21□□□□□ -0.93
COL27A1-204ENST00000477421 STARD4Q96DR4 205 aa9.21□□□□□ -0.93
COL27A1-204ENST00000477421 LURAP1Q96LR2 239 aa9.21□□□□□ -0.93
COL27A1-204ENST00000477421 TXN2Q99757 166 aa9.21□□□□□ -0.93
COL27A1-204ENST00000477421 SRD5A3Q9H8P0 318 aa9.21□□□□□ -0.93
COL27A1-204ENST00000477421 VCANP13611 3396 aa9.21□□□□□ -0.93
COL27A1-204ENST00000477421 IFNL4K9M1U5 179 aa9.21□□□□□ -0.94
COL27A1-204ENST00000477421 LINC00869P0C866 280 aa9.21□□□□□ -0.94
COL27A1-204ENST00000477421 PRB4P10163 310 aaPredicted RBP9.21□□□□□ -0.94
COL27A1-204ENST00000477421 RPL8P62917 257 aaKnown RBP9.21□□□□□ -0.94
COL27A1-204ENST00000477421 BSPH1Q075Z2 132 aa9.21□□□□□ -0.94
COL27A1-204ENST00000477421 FXYD3Q14802 87 aa9.21□□□□□ -0.94
COL27A1-204ENST00000477421 DPPA3Q6W0C5 159 aa9.21□□□□□ -0.94
COL27A1-204ENST00000477421 BARX1Q9HBU1 254 aaPredicted RBP9.21□□□□□ -0.94
COL27A1-204ENST00000477421 C1QTNF9BB2RNN3 333 aa9.21□□□□□ -0.94
COL27A1-204ENST00000477421 HSBP1O75506 76 aa9.21□□□□□ -0.94
COL27A1-204ENST00000477421 SMIM6P0DI80 62 aa9.21□□□□□ -0.94
COL27A1-204ENST00000477421 PAX5Q02548 391 aa9.21□□□□□ -0.94
COL27A1-204ENST00000477421 ARL16Q0P5N6 197 aa9.21□□□□□ -0.94
COL27A1-204ENST00000477421 ZNF146Q15072 292 aa9.21□□□□□ -0.94
COL27A1-204ENST00000477421 Q6P435 159 aa9.21□□□□□ -0.94
COL27A1-204ENST00000477421 IDI2-AS1Q9NZ38 188 aa9.21□□□□□ -0.94
COL27A1-204ENST00000477421 CRYBB3P26998 211 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 RND2P52198 227 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 PRRX1P54821 245 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 LURAP1LQ8IV03 231 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 OR1L4Q8NGR5 311 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 RNF138Q8WVD3 245 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 SNURFLB1AK76 121 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 CHEK1O14757 476 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 PDE6DO43924 150 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 IGLV3-1P01715 115 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 OR9G9P0C7N8 305 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 CRISP2P16562 243 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 ARF6P62330 175 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 OR4A47Q6IF82 309 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 COQ2Q96H96 371 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 CLUHP3Q96NS8 147 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 HIF1ANQ9NWT6 349 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 A0A1W2PNU3 283 aaPredicted RBP9.2□□□□□ -0.94
COL27A1-204ENST00000477421 LINC00473A8K010 186 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 KBTBD11O94819 623 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 MYOD1P15172 320 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 KIAA1644Q3SXP7 199 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 MORN2Q502X0 79 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 WDR86Q86TI4 376 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 RPP25LQ8N5L8 163 aaKnown RBP9.2□□□□□ -0.94
COL27A1-204ENST00000477421 GCSAMQ8N6F7 178 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 CD177Q8N6Q3 437 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 STPG3Q8N7X2 389 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 NPIPB3Q92617 1050 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 PSMG3Q9BT73 122 aaPredicted RBP9.2□□□□□ -0.94
COL27A1-204ENST00000477421 ASCL3Q9NQ33 180 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 TIMM9Q9Y5J7 89 aa9.2□□□□□ -0.94
COL27A1-204ENST00000477421 IGHV3-35A0A0C4DH35 117 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 SERTM2A0A1B0GWG4 89 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 COLCA2A8K830 154 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 CT45A10P0DMU9 189 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 IGFBP2P18065 325 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 RPL29P47914 159 aaKnown RBP9.19□□□□□ -0.94
COL27A1-204ENST00000477421 AMTP48728 403 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 RELQ04864 619 aaPredicted RBP9.19□□□□□ -0.94
COL27A1-204ENST00000477421 WDR73Q6P4I2 378 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 PARD6AQ9NPB6 346 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 ZDHHC8Q9ULC8 765 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 ZNF253O75346 499 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 CLN5O75503 358 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 Q56UQ5 140 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 Q8NFD4 153 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 OR5AU1Q8NGC0 362 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 SCNM1Q9BWG6 230 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 SFXN3Q9BWM7 321 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 FGF23Q9GZV9 251 aaPredicted RBP9.19□□□□□ -0.94
COL27A1-204ENST00000477421 SEBOXQ9HB31 216 aaPredicted RBP9.19□□□□□ -0.94
COL27A1-204ENST00000477421 TMEM167BQ9NRX6 74 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 ZNF586Q9NXT0 402 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 SAA2-SAA4A0A096LPE2 208 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 TRAV3A0A0B4J244 114 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 TRAV34A0A0B4J273 112 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 SAA2P0DJI9 122 aaPredicted RBP9.19□□□□□ -0.94
COL27A1-204ENST00000477421 PQLC2Q6ZP29 291 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 ZNRD1Q9P1U0 126 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms