RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TMEM14BQ9NUH8 114 aa13.52□□□□□ -0.25
TMEM53-208ENST00000476724 PLCE1Q9P212 2302 aa13.52□□□□□ -0.25
TMEM53-208ENST00000476724 TRAV3A0A0B4J244 114 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 DPRXA6NFQ7 191 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 CCL21O00585 134 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 PAGE4O60829 102 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 RPL23P62829 140 aaKnown RBP13.51□□□□□ -0.25
TMEM53-208ENST00000476724 LYG1Q8N1E2 194 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 OR10A7Q8NGE5 316 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 RPUSD4Q96CM3 377 aaKnown RBP13.51□□□□□ -0.25
TMEM53-208ENST00000476724 FAM122AQ96E09 287 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 ENY2Q9NPA8 101 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 DOK5Q9P104 306 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 hADV38S2A0JD32 116 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 PDE6DO43924 150 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 CASP6P55212 293 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 NDUFA6P56556 154 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 OR4A47Q6IF82 309 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 TCF23Q7RTU1 214 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 DEFB108BQ8NET1 73 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 LEAP2Q969E1 77 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 ANAPC16Q96DE5 110 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 WFIKKN1Q96NZ8 548 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 CCL13Q99616 98 aa13.51□□□□□ -0.25
TMEM53-208ENST00000476724 NBASA2RRP1 2371 aa13.5□□□□□ -0.25
TMEM53-208ENST00000476724 CLN5O75503 358 aa13.5□□□□□ -0.25
TMEM53-208ENST00000476724 GYPAP02724 150 aa13.5□□□□□ -0.25
TMEM53-208ENST00000476724 TRGC2P03986 189 aa13.5□□□□□ -0.25
TMEM53-208ENST00000476724 ABHD12Q8N2K0 398 aa13.5□□□□□ -0.25
TMEM53-208ENST00000476724 ZNF383Q8NA42 475 aa13.5□□□□□ -0.25
TMEM53-208ENST00000476724 NANPQ8TBE9 248 aa13.5□□□□□ -0.25
TMEM53-208ENST00000476724 RPUSD1Q9UJJ7 312 aaKnown RBP13.5□□□□□ -0.25
TMEM53-208ENST00000476724 DYSFO75923 2080 aa13.5□□□□□ -0.25
TMEM53-208ENST00000476724 ADGRG4Q8IZF6 3080 aa13.5□□□□□ -0.25
TMEM53-208ENST00000476724 TET2Q6N021 2002 aaPredicted RBP13.49□□□□□ -0.25
TMEM53-208ENST00000476724 NKX6-3A6NJ46 265 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 C11orf94C9JXX5 98 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 HIST1H2BKO60814 126 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 HIST1H2BJP06899 126 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 HIST1H2BOP23527 126 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 S100PP25815 95 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 HIST1H2BBP33778 126 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 HIST1H2BDP58876 126 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 HIST1H2BCP62807 126 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 BSPH1Q075Z2 132 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 HIST2H2BEQ16778 126 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.49□□□□□ -0.25
TMEM53-208ENST00000476724 NCMAPQ5T1S8 102 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 DUX4L9Q6RFH8 374 aaPredicted RBP13.49□□□□□ -0.25
TMEM53-208ENST00000476724 SLC25A48Q6ZT89 311 aaKnown RBP13.49□□□□□ -0.25
TMEM53-208ENST00000476724 GATAD1Q8WUU5 269 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 HIST1H2BHQ93079 126 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 HIST1H2BNQ99877 126 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 HIST1H2BMQ99879 126 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 MS4A5Q9H3V2 200 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 PRNDQ9UKY0 176 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 ZNF257Q9Y2Q1 563 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 LINC00312Q9Y6C7 94 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 FAM90A27PA6NNH2 459 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 FNDC10F2Z333 226 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 MEF2CQ06413 473 aaPredicted RBP13.49□□□□□ -0.25
TMEM53-208ENST00000476724 CDSNQ15517 529 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 UTF1Q5T230 341 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 SLC16A13Q7RTY0 426 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 SLC24A4Q8NFF2 622 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 OR5B12Q96R08 314 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 MGST2Q99735 147 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 PYGO2Q9BRQ0 406 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 GGTLC1Q9BX51 225 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 LSM4Q9Y4Z0 139 aaKnown RBP13.49□□□□□ -0.25
TMEM53-208ENST00000476724 PXMP4Q9Y6I8 212 aa13.49□□□□□ -0.25
TMEM53-208ENST00000476724 RAI1Q7Z5J4 1906 aaPredicted RBP13.49□□□□□ -0.25
TMEM53-208ENST00000476724 TPRP12270 2363 aaKnown RBP13.48□□□□□ -0.25
TMEM53-208ENST00000476724 PKD1L2Q7Z442 2459 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 ELOA3CA0A087WX78 387 aaPredicted RBP13.48□□□□□ -0.25
TMEM53-208ENST00000476724 TRAV38-1A0A0B4J264 116 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 F6UZH7 168 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 PFN1P07737 140 aaKnown RBP13.48□□□□□ -0.25
TMEM53-208ENST00000476724 IL6RP08887 468 aaPredicted RBP13.48□□□□□ -0.25
TMEM53-208ENST00000476724 NPY1RP25929 384 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 ATP5IP56385 69 aaPredicted RBP13.48□□□□□ -0.25
TMEM53-208ENST00000476724 ADORA2A-AS1P86434 159 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 RAB31Q13636 194 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 C16orf82Q7Z2V1 217 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 FAM216BQ8N7L0 139 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 TMEM170AQ8WVE7 144 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 C17orf100A8MU93 164 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 VSTM5A8MXK1 200 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 H7BYZ3 331 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 YIF1AO95070 293 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 CXorf1O96002 111 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 STAG3L2P0CL84 134 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 STAG3L3P0CL85 134 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 RTL8BQ17RB0 113 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 TEPPQ6URK8 271 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 TGIF2LYQ8IUE0 185 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 GAL3ST2Q9H3Q3 398 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 SRD5A3Q9H8P0 318 aa13.48□□□□□ -0.25
TMEM53-208ENST00000476724 GRNP28799 593 aaKnown RBP13.47□□□□□ -0.25
TMEM53-208ENST00000476724 PLA2G5P39877 138 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms