RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 DTX2Q86UW9 622 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 CYB561D1Q8N8Q1 229 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 ZNF709Q8N972 641 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 LY6G5BQ8NDX9 201 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 VSTM2AQ8TAG5 236 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 LHX4Q969G2 390 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 NEIL1Q96FI4 390 aaPredicted RBP7.97□□□□□ -1.13
USP39-214ENST00000474572 C1orf159Q96HA4 380 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 YPEL4Q96NS1 127 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 MGST2Q99735 147 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 GGTLC1Q9BX51 225 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 TMEM133Q9H2Q1 129 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 NPVFQ9HCQ7 196 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 RPS10P5Q9NQ39 176 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 KCNIP2Q9NS61 270 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 RALYQ9UKM9 306 aaKnown RBP7.97□□□□□ -1.13
USP39-214ENST00000474572 DCHS1Q96JQ0 3298 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 DOCK11Q5JSL3 2073 aa7.96□□□□□ -1.13
USP39-214ENST00000474572 PRRC2CQ9Y520 2896 aaKnown RBP7.96□□□□□ -1.14
USP39-214ENST00000474572 H3BQ15 152 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 CYB5BO43169 146 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 YIF1AO95070 293 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 IGLV2-23P01705 113 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 SNRNP70P08621 437 aaKnown RBP7.96□□□□□ -1.14
USP39-214ENST00000474572 MYOD1P15172 320 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 USF1P22415 310 aaPredicted RBP7.96□□□□□ -1.14
USP39-214ENST00000474572 IL3RAP26951 378 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 RAB13P51153 203 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 FGF8P55075 233 aaPredicted RBP7.96□□□□□ -1.14
USP39-214ENST00000474572 RNF212Q495C1 297 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 ARSJQ5FYB0 599 aaPredicted RBP7.96□□□□□ -1.14
USP39-214ENST00000474572 RBMS3Q6XE24 437 aaKnown RBP7.96□□□□□ -1.14
USP39-214ENST00000474572 SLC35E3Q7Z769 313 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 OR4C13Q8NGP0 309 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 OR1L8Q8NGR8 309 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 OR10X1Q8NGY0 326 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 RAB24Q969Q5 203 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 HARBI1Q96MB7 349 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 SLC25A22Q9H936 323 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 PLEKHA3Q9HB20 300 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 ENY2Q9NPA8 101 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 MANBALQ9NQG1 85 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 WASHC3Q9Y3C0 194 aa7.96□□□□□ -1.14
USP39-214ENST00000474572 POLEQ07864 2286 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 IGHV2-26A0A0B4J1V2 119 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 ZFP92A6NM28 416 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 LYNX1G3V0Z9 82 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 TMEM250H0YL14 139 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 M0R036 132 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 CA2P00918 260 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 FBP1P09467 338 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 LYNX1P0DP58 116 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 RNASE2P10153 161 aaKnown RBP7.95□□□□□ -1.14
USP39-214ENST00000474572 AGAP20933 346 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 MC5RP33032 325 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 RPL29P47914 159 aaKnown RBP7.95□□□□□ -1.14
USP39-214ENST00000474572 CDC34P49427 236 aaPredicted RBP7.95□□□□□ -1.14
USP39-214ENST00000474572 CD81P60033 236 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 PNRC1Q12796 327 aaPredicted RBP7.95□□□□□ -1.14
USP39-214ENST00000474572 DIAPH2-AS1Q14236 149 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 HLA-DRB5Q30154 266 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 FAM122CQ6P4D5 195 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 TGIF2LXQ8IUE1 241 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 BEND2Q8NDZ0 799 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 NEU4Q8WWR8 484 aaPredicted RBP7.95□□□□□ -1.14
USP39-214ENST00000474572 HIST1H2BAQ96A08 127 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 FLYWCH2Q96CP2 140 aaKnown RBP7.95□□□□□ -1.14
USP39-214ENST00000474572 TVP23CQ96ET8 276 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 RAB1BQ9H0U4 201 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 NDUFA4L2Q9NRX3 87 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 MIOXQ9UGB7 285 aa7.95□□□□□ -1.14
USP39-214ENST00000474572 ATMQ13315 3056 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 BOD1L1Q8NFC6 3051 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 ICE1Q9Y2F5 2266 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 A0A1W2PN81 502 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 A0A1W2PPH5 198 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 CGB1A6NKQ9 187 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 B4DEV8 164 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 IFNA4P05014 189 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 CRYGBP07316 175 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 STAG3L2P0CL84 134 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 STAG3L3P0CL85 134 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 CHRNA7P36544 502 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 PLA2G5P39877 138 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 PSMB3P49720 205 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 RPL8P62917 257 aaKnown RBP7.94□□□□□ -1.14
USP39-214ENST00000474572 PRR20EP86478 221 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 PRR20CP86479 221 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 PRR20DP86480 221 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 PRR20BP86481 221 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 PRR20AP86496 221 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 MEF2BQ02080 365 aaPredicted RBP7.94□□□□□ -1.14
USP39-214ENST00000474572 LY6DQ14210 128 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 MRGPRG-AS1Q2M3A8 158 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 C4orf17Q53FE4 359 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 AVPI1Q5T686 147 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 WDR25Q64LD2 544 aaPredicted RBP7.94□□□□□ -1.14
USP39-214ENST00000474572 PVRIGQ6DKI7 326 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 OR8B3Q8NGG8 313 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 MALSU1Q96EH3 234 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms