RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 TMEM230Q96A57 120 aa8.55□□□□□ -1.04
SEMA4D-216ENST00000474258 FLYWCH2Q96CP2 140 aaKnown RBP8.55□□□□□ -1.04
SEMA4D-216ENST00000474258 ZNF486Q96H40 463 aaPredicted RBP8.55□□□□□ -1.04
SEMA4D-216ENST00000474258 CLCC1Q96S66 551 aa8.55□□□□□ -1.04
SEMA4D-216ENST00000474258 TSNAXQ99598 290 aaKnown RBP8.55□□□□□ -1.04
SEMA4D-216ENST00000474258 NEURL2Q9BR09 285 aa8.55□□□□□ -1.04
SEMA4D-216ENST00000474258 FXYD6Q9H0Q3 95 aa8.55□□□□□ -1.04
SEMA4D-216ENST00000474258 TPSG1Q9NRR2 321 aa8.55□□□□□ -1.04
SEMA4D-216ENST00000474258 OR1A1Q9P1Q5 309 aa8.55□□□□□ -1.04
SEMA4D-216ENST00000474258 TNCP24821 2201 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 IGHV4OR15-8A0A075B7B6 117 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 A0A087WW49 117 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 A0A0B4J2A0 478 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 IGKV1D-13A0A0B4J2D9 117 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 PROP1O75360 226 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 SPDEFO95238 335 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 CA2P00918 260 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 IGKV1-13P0DP09 117 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 PGAM2P15259 253 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 GNRHRP30968 328 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 RND3P61587 244 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 RRAS2P62070 204 aaPredicted RBP8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 MSMO1Q15800 293 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 ACSM6Q6P461 480 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 ZNF383Q8NA42 475 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 LFNGQ8NES3 379 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 RHOVQ96L33 236 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 MS4A10Q96PG2 267 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 SEC22CQ9BRL7 303 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 FAM103A1Q9BTL3 118 aaKnown RBP8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 SLA2Q9H6Q3 261 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 RDH8Q9NYR8 311 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 SHPKQ9UHJ6 478 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 GAB2Q9UQC2 676 aa8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 C14orf166Q9Y224 244 aaKnown RBP8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 KMT2CQ8NEZ4 4911 aaKnown RBP8.54□□□□□ -1.04
SEMA4D-216ENST00000474258 C9orf170A2RU37 121 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 C3orf84H3BNL1 204 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 CREBL2O60519 120 aaPredicted RBP8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 PFDN1O60925 122 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 SFT2D2O95562 160 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 IGHV3-11P01762 117 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 APOA2P02652 100 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 IGKV1-16P04430 117 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 OR8U9P0C7N5 309 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 SULT1A3P0DMM9 295 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 SULT1A4P0DMN0 295 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 GP9P14770 177 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 HLA-GP17693 338 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 PI3P19957 117 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 TPPP2P59282 170 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 FXYD4P59646 89 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 DHRS2Q13268 280 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 PPP1R1AQ13522 171 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 FXYD3Q14802 87 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 C4orf46Q504U0 113 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 LYG2Q86SG7 212 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 PDPNQ86YL7 162 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 BVESQ8NE79 360 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 MITD1Q8WV92 249 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 ARPC1AQ92747 370 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 PPP1R14BQ96C90 147 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 OR4C12Q96R67 309 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 SLC5A7Q9GZV3 580 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 MED28Q9H204 178 aa8.53□□□□□ -1.04
SEMA4D-216ENST00000474258 CRYM-AS1A6NIL9 109 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 M0R1X1 148 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 GPR31O00270 319 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 SLC25A17O43808 307 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 IGLV2-14P01704 120 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 TRGV3P03979 118 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 AKR1C4P17516 323 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 PIGPP57054 158 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 LINC00205P59089 165 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 SUPT4H1P63272 117 aaKnown RBP8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 CBX3Q13185 183 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 FCN2Q15485 313 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 KCTD9Q7L273 389 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 C12orf45Q8N5I9 185 aaPredicted RBP8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 ZBTB34Q8NCN2 500 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 OR52B4Q8NGK2 314 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 GALNT14Q96FL9 552 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 ELOVL1Q9BW60 279 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 CCL28Q9NRJ3 127 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 SLC2A9Q9NRM0 540 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 ZNF355PQ9NSJ1 428 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 SLC35D1Q9NTN3 355 aa8.52□□□□□ -1.05
SEMA4D-216ENST00000474258 C13orf42A0A1B0GVH6 325 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 H3BUA1 57 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 MPPED1O15442 326 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 PGLYRP1O75594 196 aaPredicted RBP8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 SLC22A5O76082 557 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 CNIH1O95406 144 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 LGALS7P47929 136 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 TAGLNQ01995 201 aaKnown RBP8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 ZNF818PQ6ZRF7 136 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 SBSPONQ8IVN8 264 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 SGPP2Q8IWX5 399 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 CCDC71LQ8N9Z2 235 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms