RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 OR4C45A6NMZ5 311 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 UBBP0CG47 229 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 EIF2B2P49770 351 aaKnown RBP0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 MGAT3Q09327 533 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 PPP1R1AQ13522 171 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 Q1T7F1 81 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 ACSM3Q53FZ2 586 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 GLT8D1Q68CQ7 371 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 DYNAPQ8N1N2 210 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 RIBC1Q8N443 379 aaPredicted RBP0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 TMEM251Q8N6I4 163 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 RNASE6Q93091 150 aaKnown RBP0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 ANAPC10Q9UM13 185 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 RBM7Q9Y580 266 aaKnown RBP0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 TIMM22Q9Y584 194 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 SCAF11Q99590 1463 aaKnown RBP0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 CHD5Q8TDI0 1954 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 ABCC12Q96J65 1359 aa0.83□□□□□ -2.28
ECHDC1-213ENST00000474240 MED13Q9UHV7 2174 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 GOLGA8KD6RF30 607 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 I3L521 148 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 GEMIN2O14893 280 aaKnown RBP0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 LEPROTO15243 131 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 PLA2G10O15496 165 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 BRI3O95415 125 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 PMP2P02689 132 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 C1QAP02745 245 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 PSMB6P28072 239 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 FXYD2P54710 66 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 KRTAP10-4P60372 401 aaPredicted RBP0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 SKP1P63208 163 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 DMTNQ08495 405 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 FAM27BQ5VT28 67 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 COMMD7Q86VX2 200 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 WFDC11Q8NEX6 87 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 PIGXQ8TBF5 258 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 DIRAS2Q96HU8 199 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 ODF3Q96PU9 254 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 UPF3BQ9BZI7 483 aaKnown RBP0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 HDHD2Q9H0R4 259 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 TRABDQ9H4I3 376 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 USE1Q9NZ43 259 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 PXMP4Q9Y6I8 212 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 RAD50Q92878 1312 aa0.82□□□□□ -2.28
ECHDC1-213ENST00000474240 GGT3PA6NGU5 568 aa0.81□□□□□ -2.28
ECHDC1-213ENST00000474240 NDUFS6O75380 124 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-213ENST00000474240 TYMSP04818 313 aa0.81□□□□□ -2.28
ECHDC1-213ENST00000474240 SRP19P09132 144 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-213ENST00000474240 FAM228BP0C875 321 aa0.81□□□□□ -2.28
ECHDC1-213ENST00000474240 STX5Q13190 355 aa0.81□□□□□ -2.28
ECHDC1-213ENST00000474240 RSU1Q15404 277 aa0.81□□□□□ -2.28
ECHDC1-213ENST00000474240 COQ5Q5HYK3 327 aa0.81□□□□□ -2.28
ECHDC1-213ENST00000474240 SAPCD1Q5SSQ6 148 aa0.81□□□□□ -2.28
ECHDC1-213ENST00000474240 DHFR2Q86XF0 187 aa0.81□□□□□ -2.28
ECHDC1-213ENST00000474240 FUT9Q9Y231 359 aa0.81□□□□□ -2.28
ECHDC1-213ENST00000474240 MYH11P35749 1972 aa0.81□□□□□ -2.28
ECHDC1-213ENST00000474240 ABCC11Q96J66 1382 aa0.81□□□□□ -2.28
ECHDC1-213ENST00000474240 KIF15Q9NS87 1388 aa0.81□□□□□ -2.28
ECHDC1-213ENST00000474240 NAV1Q8NEY1 1877 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 RTTNQ86VV8 2226 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 SMARCA4P51532 1647 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 C1orf232A0A0U1RR37 186 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 FABP12A6NFH5 140 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 F5H768 121 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 SLC16A4O15374 487 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 OR5F1O95221 314 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 NSA2O95478 260 aaKnown RBP0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 IGHV3-7P01780 117 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 SHBGP04278 402 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 TFPTP0C1Z6 253 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 DEFA4P12838 97 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 AP2S1P53680 142 aaPredicted RBP0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 IFITM2Q01629 132 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 OR1M1Q8NGA1 313 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 OR5B17Q8NGF7 314 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 OR4C6Q8NH72 309 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 C11orf40Q8WZ69 217 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 MAP1LC3AQ9H492 121 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 PLEKHJ1Q9NW61 149 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 PAQR5Q9NXK6 330 aaPredicted RBP0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 NKIRAS1Q9NYS0 192 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 C3orf18Q9UK00 162 aa0.8□□□□□ -2.28
ECHDC1-213ENST00000474240 PTPRBP23467 1997 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 FABP5P3A8MUU1 101 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 M0QX08 132 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 HCRTO43612 131 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 TPM3P06753 285 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 FGF6P10767 208 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 HLA-DMBP28068 263 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 CD151P48509 253 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 BLVRAP53004 296 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 MAP3K7CLP57077 242 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 UBE2G2P60604 165 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 RUNX1Q01196 453 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 RPL18Q07020 188 aaKnown RBP0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 GRK1Q15835 563 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 C10orf55Q5SWW7 151 aa0.79□□□□□ -2.28
ECHDC1-213ENST00000474240 TEX36Q5VZQ5 186 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms