RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 PSMB6P28072 239 aa8.55□□□□□ -1.04
CKS1B-206ENST00000474215 LPAR6P43657 344 aa8.55□□□□□ -1.04
CKS1B-206ENST00000474215 OR2B8PP59922 312 aa8.55□□□□□ -1.04
CKS1B-206ENST00000474215 EXOSC2Q13868 293 aaKnown RBP8.55□□□□□ -1.04
CKS1B-206ENST00000474215 RPEL1Q2QD12 228 aa8.55□□□□□ -1.04
CKS1B-206ENST00000474215 C15orf32Q32M92 178 aa8.55□□□□□ -1.04
CKS1B-206ENST00000474215 FAM209BQ5JX69 171 aa8.55□□□□□ -1.04
CKS1B-206ENST00000474215 C11orf87Q6NUJ2 197 aa8.55□□□□□ -1.04
CKS1B-206ENST00000474215 IL34Q6ZMJ4 242 aa8.55□□□□□ -1.04
CKS1B-206ENST00000474215 OR9G4Q8NGQ1 327 aa8.55□□□□□ -1.04
CKS1B-206ENST00000474215 RSRP1Q9BUV0 290 aa8.55□□□□□ -1.04
CKS1B-206ENST00000474215 COMMD5Q9GZQ3 224 aa8.55□□□□□ -1.04
CKS1B-206ENST00000474215 TMEM140Q9NV12 185 aa8.55□□□□□ -1.04
CKS1B-206ENST00000474215 COMMD9Q9P000 198 aa8.55□□□□□ -1.04
CKS1B-206ENST00000474215 FBXL7Q9UJT9 491 aa8.55□□□□□ -1.04
CKS1B-206ENST00000474215 SMAD5-AS1Q9Y6J3 95 aa8.55□□□□□ -1.04
CKS1B-206ENST00000474215 TNCP24821 2201 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 CGB1A6NKQ9 187 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 BMPR1BO00238 502 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 DEFA4P12838 97 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 GP9P14770 177 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 RPA2P15927 270 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 HIST1H1BP16401 226 aaKnown RBP8.54□□□□□ -1.04
CKS1B-206ENST00000474215 CTRB1P17538 263 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 S100GP29377 79 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 ERVK-16P61578 105 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 KLK9Q2XQG4 91 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 ZNF585BQ52M93 769 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 CTRB2Q6GPI1 263 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 C19orf35Q6ZS72 473 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 CADM3Q8N126 398 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 C15orf40Q8WUR7 153 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 FCAMRQ8WWV6 532 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 FANCD2OSQ96PS1 177 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 FXYD6Q9H0Q3 95 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 EXTL2Q9UBQ6 330 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 KLK11Q9UBX7 282 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 KLK9Q9UKQ9 250 aa8.54□□□□□ -1.04
CKS1B-206ENST00000474215 MARCH11A6NNE9 402 aa8.53□□□□□ -1.04
CKS1B-206ENST00000474215 M0QYG6 137 aa8.53□□□□□ -1.04
CKS1B-206ENST00000474215 NDUFB8O95169 186 aa8.53□□□□□ -1.04
CKS1B-206ENST00000474215 KRASP01116 189 aa8.53□□□□□ -1.04
CKS1B-206ENST00000474215 IFNA6P05013 189 aa8.53□□□□□ -1.04
CKS1B-206ENST00000474215 REG1AP05451 166 aa8.53□□□□□ -1.04
CKS1B-206ENST00000474215 CSN3P07498 182 aa8.53□□□□□ -1.04
CKS1B-206ENST00000474215 UCP3P55916 312 aa8.53□□□□□ -1.04
CKS1B-206ENST00000474215 SPCS2Q15005 226 aa8.53□□□□□ -1.04
CKS1B-206ENST00000474215 PHLDA2Q53GA4 152 aa8.53□□□□□ -1.04
CKS1B-206ENST00000474215 HAPLN4Q86UW8 402 aa8.53□□□□□ -1.04
CKS1B-206ENST00000474215 OR52I2Q8NH67 350 aa8.53□□□□□ -1.04
CKS1B-206ENST00000474215 ABHD1Q96SE0 405 aa8.53□□□□□ -1.04
CKS1B-206ENST00000474215 SRSF8Q9BRL6 282 aaKnown RBP8.53□□□□□ -1.04
CKS1B-206ENST00000474215 QTRT1Q9BXR0 403 aaKnown RBP8.53□□□□□ -1.04
CKS1B-206ENST00000474215 SIGLEC8Q9NYZ4 499 aa8.53□□□□□ -1.04
CKS1B-206ENST00000474215 DMRT1Q9Y5R6 373 aa8.53□□□□□ -1.04
CKS1B-206ENST00000474215 IGLV11-55A0A075B6I3 123 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 TEX50A0A1B0GTY4 177 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 IGLC7A0M8Q6 106 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 H0Y980 276 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 CTDSP2O14595 271 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 RGS5O15539 181 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 GGCTO75223 188 aaKnown RBP8.52□□□□□ -1.05
CKS1B-206ENST00000474215 SNAPC5O75971 98 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 CD3DP04234 171 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 TRAPPC2P0DI81 140 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 TRAPPC2BP0DI82 140 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 G6PCP35575 357 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 TMBIM6P55061 237 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 RNASE12Q5GAN4 147 aaKnown RBP8.52□□□□□ -1.05
CKS1B-206ENST00000474215 RNASE10Q5GAN6 216 aaKnown RBP8.52□□□□□ -1.05
CKS1B-206ENST00000474215 TBC1D26Q86UD7 250 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 CLVS1Q8IUQ0 354 aaPredicted RBP8.52□□□□□ -1.05
CKS1B-206ENST00000474215 SLC38A6Q8IZM9 456 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 OR10W1Q8NGF6 305 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 RAB2BQ8WUD1 216 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 MIXL1Q9H2W2 232 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 FAM212BQ9NTI7 297 aaPredicted RBP8.52□□□□□ -1.05
CKS1B-206ENST00000474215 PEMTQ9UBM1 199 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 MTFP1Q9UDX5 166 aa8.52□□□□□ -1.05
CKS1B-206ENST00000474215 PPP5D1E7EU14 171 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 OR2C1O95371 312 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 IGHV3-23P01764 117 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 HLA-AP01891 365 aaKnown RBP8.51□□□□□ -1.05
CKS1B-206ENST00000474215 TBPP20226 339 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 MECP2P51608 486 aaKnown RBP8.51□□□□□ -1.05
CKS1B-206ENST00000474215 DMRTA1Q5VZB9 504 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 THOC7Q6I9Y2 204 aaKnown RBP8.51□□□□□ -1.05
CKS1B-206ENST00000474215 CLEC19AQ6UXS0 136 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 HSD17B13Q7Z5P4 300 aaPredicted RBP8.51□□□□□ -1.05
CKS1B-206ENST00000474215 Q8N1Y9 231 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 ARRDC1Q8N5I2 433 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 OR1L8Q8NGR8 309 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 EEF1AKMT3Q96AZ1 226 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 CXorf58Q96LI9 332 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 CCDC140Q96MF4 163 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 ASCL2Q99929 193 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 BCL7BQ9BQE9 202 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 FKBP11Q9NYL4 201 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 OR51B2Q9Y5P1 312 aa8.51□□□□□ -1.05
CKS1B-206ENST00000474215 S4R3C0 116 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms