RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 C10orf55Q5SWW7 151 aa10.71□□□□□ -0.69
USF1-205ENST00000473969 H2BFWTQ7Z2G1 175 aa10.71□□□□□ -0.69
USF1-205ENST00000473969 GDPD1Q8N9F7 314 aa10.71□□□□□ -0.69
USF1-205ENST00000473969 OR11H1Q8NG94 326 aa10.71□□□□□ -0.69
USF1-205ENST00000473969 MYOZ3Q8TDC0 251 aa10.71□□□□□ -0.69
USF1-205ENST00000473969 SLC2A8Q9NY64 477 aa10.71□□□□□ -0.69
USF1-205ENST00000473969 FKBP11Q9NYL4 201 aa10.71□□□□□ -0.69
USF1-205ENST00000473969 RBMXL2O75526 392 aaKnown RBP10.7□□□□□ -0.7
USF1-205ENST00000473969 FGF2P09038 288 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 DEFA4P12838 97 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 ZNF45Q02386 682 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 DEFB136Q30KP8 78 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 ASPHD1Q5U4P2 390 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 THOC7Q6I9Y2 204 aaKnown RBP10.7□□□□□ -0.7
USF1-205ENST00000473969 MRPL41Q8IXM3 137 aaKnown RBP10.7□□□□□ -0.7
USF1-205ENST00000473969 CADM3Q8N126 398 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 TTC9CQ8N5M4 171 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 OR1N2Q8NGR9 330 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 OR4A16Q8NH70 328 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 RNASE11Q8TAA1 199 aaKnown RBP10.7□□□□□ -0.7
USF1-205ENST00000473969 TRIM63Q969Q1 353 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 RAX2Q96IS3 184 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 MCRIP2Q9BUT9 160 aaKnown RBP10.7□□□□□ -0.7
USF1-205ENST00000473969 GPR61Q9BZJ8 451 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 SRRQ9GZT4 340 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 GNB4Q9HAV0 340 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 PRNDQ9UKY0 176 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 GPR132Q9UNW8 380 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 KCNIP3Q9Y2W7 256 aa10.7□□□□□ -0.7
USF1-205ENST00000473969 TRAV3A0A0B4J244 114 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 HMX3A6NHT5 357 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 CENPXA8MT69 81 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 CYB5BO43169 146 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 DUS4LO95620 317 aaKnown RBP10.69□□□□□ -0.7
USF1-205ENST00000473969 IGHV3-11P01762 117 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 IL6RP08887 468 aaPredicted RBP10.69□□□□□ -0.7
USF1-205ENST00000473969 LGALS1P09382 135 aaKnown RBP10.69□□□□□ -0.7
USF1-205ENST00000473969 OR8U8P0C7N1 319 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 AKR1C2P52895 323 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 RUNX1Q01196 453 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 ZNF616Q08AN1 781 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 KLF9Q13886 244 aaPredicted RBP10.69□□□□□ -0.7
USF1-205ENST00000473969 KIAA0141Q14154 515 aaPredicted RBP10.69□□□□□ -0.7
USF1-205ENST00000473969 SGPP2Q8IWX5 399 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 ADAD2Q8NCV1 583 aaKnown RBP10.69□□□□□ -0.7
USF1-205ENST00000473969 WFDC9Q8NEX5 89 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 OR1L8Q8NGR8 309 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 RCC1LQ96I51 464 aaKnown RBP10.69□□□□□ -0.7
USF1-205ENST00000473969 USMG5Q96IX5 58 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 DUX3Q96PT4 197 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 RTBDNQ9BSG5 229 aaPredicted RBP10.69□□□□□ -0.7
USF1-205ENST00000473969 HINT2Q9BX68 163 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 BATF3Q9NR55 127 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 ZNF257Q9Y2Q1 563 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 OR51B2Q9Y5P1 312 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 PLXNB1O43157 2135 aa10.69□□□□□ -0.7
USF1-205ENST00000473969 WNK1Q9H4A3 2382 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 TRRAPQ9Y4A5 3859 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 A6NHS1 94 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 I3L521 148 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 BRI3O95415 125 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 TRAPPC2P0DI81 140 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 TRAPPC2BP0DI82 140 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 DHODHQ02127 395 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 SP6Q3SY56 376 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 ETV3LQ6ZN32 361 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 HSD17B13Q7Z5P4 300 aaPredicted RBP10.68□□□□□ -0.7
USF1-205ENST00000473969 LINC00482Q8N8I6 264 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 MRGPRFQ96AM1 343 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 RRNAD1Q96FB5 475 aaKnown RBP10.68□□□□□ -0.7
USF1-205ENST00000473969 TP53RKQ96S44 253 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 P2RX4Q99571 388 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 SRSF8Q9BRL6 282 aaKnown RBP10.68□□□□□ -0.7
USF1-205ENST00000473969 QTRT1Q9BXR0 403 aaKnown RBP10.68□□□□□ -0.7
USF1-205ENST00000473969 NAA60Q9H7X0 242 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 NSG2Q9Y328 171 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 MGAM2Q2M2H8 2515 aa10.68□□□□□ -0.7
USF1-205ENST00000473969 NAP1L6A6NFF2 107 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 FAM223BA6NKX1 122 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 NPIPB5A8MRT5 1133 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 TEX22C9J3V5 150 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 LINC01619G3V211 115 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 HSPB1P04792 205 aaKnown RBP10.67□□□□□ -0.7
USF1-205ENST00000473969 ANXA3P12429 323 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 MYOD1P15172 320 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 IGLL1P15814 213 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 HIST1H1BP16401 226 aaKnown RBP10.67□□□□□ -0.7
USF1-205ENST00000473969 AKR1C4P17516 323 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 PSMB6P28072 239 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 MECP2P51608 486 aaKnown RBP10.67□□□□□ -0.7
USF1-205ENST00000473969 OR2B8PP59922 312 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 ATP5G2Q06055 141 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 C1QL4Q86Z23 238 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 FAM223AQ8IWN6 122 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 SEC22AQ96IW7 307 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 TMEM56Q96MV1 263 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 SLC25A21Q9BQT8 299 aaPredicted RBP10.67□□□□□ -0.7
USF1-205ENST00000473969 C5orf66Q9H5L9 145 aa10.67□□□□□ -0.7
USF1-205ENST00000473969 TEX50A0A1B0GTY4 177 aa10.66□□□□□ -0.7
USF1-205ENST00000473969 CRYM-AS1A6NIL9 109 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms