RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 RABL2BQ9UNT1 228 aa9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 LSM4Q9Y4Z0 139 aaKnown RBP9.97□□□□□ -0.81
SHROOM3-204ENST00000473602 NPIPB5A8MRT5 1133 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 TEX22C9J3V5 150 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 S1PR2O95136 353 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 DHFRP00374 187 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 IFNA6P05013 189 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 IL6RP08887 468 aaPredicted RBP9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 ERVK-16P61578 105 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 SSBP1Q04837 148 aaKnown RBP9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 RNASE10Q5GAN6 216 aaKnown RBP9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 CASC10Q5T4H9 136 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 LAX1Q8IWV1 398 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 SLC38A6Q8IZM9 456 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 ARRDC1Q8N5I2 433 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 NECAP1Q8NC96 275 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 DMBX1Q8NFW5 382 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 DYNC2LI1Q8TCX1 351 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 FCAMRQ8WWV6 532 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 DGCR14Q96DF8 476 aaKnown RBP9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 ABHD1Q96SE0 405 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 SRSF8Q9BRL6 282 aaKnown RBP9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 RSRP1Q9BUV0 290 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 MIXL1Q9H2W2 232 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 SLC2A9Q9NRM0 540 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 KLK11Q9UBX7 282 aa9.96□□□□□ -0.82
SHROOM3-204ENST00000473602 LYSTQ99698 3801 aa9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 DPPA5A6NC42 116 aa9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 MARCH11A6NNE9 402 aa9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 GABARAPH6UMI1 98 aa9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 UPK2O00526 184 aa9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 RHOGP84095 191 aa9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 THOC7Q6I9Y2 204 aaKnown RBP9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 ACSM6Q6P461 480 aa9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 OR52I2Q8NH67 350 aa9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 MUC7Q8TAX7 377 aa9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 FYTTD1Q96QD9 318 aaKnown RBP9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 PRR25Q96S07 402 aa9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 COMMD5Q9GZQ3 224 aa9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 TMEM140Q9NV12 185 aa9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 GAR1Q9NY12 217 aaKnown RBP9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 PEF1Q9UBV8 284 aaKnown RBP9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 ZNF256Q9Y2P7 627 aaPredicted RBP9.95□□□□□ -0.82
SHROOM3-204ENST00000473602 HMX3A6NHT5 357 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 E7EUB6 86 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 H3BMQ9 156 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 M0QYG6 137 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 CTDSP2O14595 271 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 SAP30O75446 220 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 CRYGCP07315 174 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 PSMB6P28072 239 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 ECI1P42126 302 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 TAS2R19P59542 299 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 ZNF45Q02386 682 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 ATP5G2Q06055 141 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 KLK9Q2XQG4 91 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 PHLDA2Q53GA4 152 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 RNASE12Q5GAN4 147 aaKnown RBP9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 HSD17B13Q7Z5P4 300 aaPredicted RBP9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 LHFPL1Q86WI0 220 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 TMEM229BQ8NBD8 167 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 ISOC1Q96CN7 298 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 ZNF486Q96H40 463 aaPredicted RBP9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 OR4C12Q96R67 309 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 ELOVL1Q9BW60 279 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 AKIP1Q9NQ31 210 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 KLK9Q9UKQ9 250 aa9.94□□□□□ -0.82
SHROOM3-204ENST00000473602 A0A1B0GW64 132 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 ANKRD34BA5PLL1 514 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 CTDSPLO15194 276 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 RBMXL2O75526 392 aaKnown RBP9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 CD74P04233 296 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 CD3DP04234 171 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 HIST1H1BP16401 226 aaKnown RBP9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 CTRB1P17538 263 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 PTBP1P26599 531 aaKnown RBP eCLIP9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 LPAR6P43657 344 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 OR2B8PP59922 312 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 RND3P61587 244 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 DEFA5Q01523 94 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 EXOSC2Q13868 293 aaKnown RBP9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 KLF5Q13887 457 aaPredicted RBP9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 TATDN3Q17R31 274 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 ZNF585BQ52M93 769 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 CTRB2Q6GPI1 263 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 TBC1D26Q86UD7 250 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 OR6Q1Q8NGQ2 317 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 SMIM4Q8WVI0 70 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 DIRAS2Q96HU8 199 aa9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 SLIRPQ9GZT3 109 aaKnown RBP9.93□□□□□ -0.82
SHROOM3-204ENST00000473602 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.92□□□□□ -0.82
SHROOM3-204ENST00000473602 CGB1A6NKQ9 187 aa9.92□□□□□ -0.82
SHROOM3-204ENST00000473602 KRASP01116 189 aa9.92□□□□□ -0.82
SHROOM3-204ENST00000473602 PRH1P02810 166 aa9.92□□□□□ -0.82
SHROOM3-204ENST00000473602 AREGP15514 252 aa9.92□□□□□ -0.82
SHROOM3-204ENST00000473602 MEF2DQ14814 521 aa9.92□□□□□ -0.82
SHROOM3-204ENST00000473602 RPEL1Q2QD12 228 aa9.92□□□□□ -0.82
SHROOM3-204ENST00000473602 C15orf32Q32M92 178 aa9.92□□□□□ -0.82
SHROOM3-204ENST00000473602 TSC22D3Q99576 134 aa9.92□□□□□ -0.82
SHROOM3-204ENST00000473602 QTRT1Q9BXR0 403 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms